Gene Shew_3642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3642 
Symbol 
ID4922176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand- 
Start bp4343468 
End bp4344013 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content56% 
IMG OID640165264 
Producthypothetical protein 
Protein accessionYP_001095767 
Protein GI127514570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.886653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGAC GCTTGATGGA TTACCTCAGG CTTTTGCTGT TTGTCTGCGG CGTGCTGCTC 
GGAGTGCAGA TGCCGGCCTT TGTGGATCAG TATGGCAAGG CGCTTGCGGC TCATACCCAG 
GAGGCCAAAC AGAGTCTGGC CGAGTTTCAG CGTGATGCCG ACCGTTTCTT CGGCGGCGAT 
ATCGACAAGC TGATCGCCCA CTATAAGCAG AATCCCGATG CCGTGTTTAA CGCCGGTGGT 
GAGAGCATAG AGGCGCTGTA TCAGAGGTAT CAGTTGCTGT CTGCAGCGCT GACTGAGTTC 
AATCAATCAC CCTACGGTGG ATTCGACAGG CTTGTGCTTG CGCCTCTGCC TGAGATCCGA 
GACCAGGTGT GGCAGCATTT CAGCCACAGC ATACTGCTGG ATGGTCGCGC CATCGCCTTC 
GGTCTGGTGT TCGGCCTGCT GTTTGCCATG TTTTGCGAGT TGACGCTACA CGGCTGCGGC 
CATTGTTGCC TTGGCGCCTA TCGTCGCCTC AAGTCTAAAG CTGAGCCGCA GCCAGAGAAC 
AGGTAA
 
Protein sequence
MIRRLMDYLR LLLFVCGVLL GVQMPAFVDQ YGKALAAHTQ EAKQSLAEFQ RDADRFFGGD 
IDKLIAHYKQ NPDAVFNAGG ESIEALYQRY QLLSAALTEF NQSPYGGFDR LVLAPLPEIR 
DQVWQHFSHS ILLDGRAIAF GLVFGLLFAM FCELTLHGCG HCCLGAYRRL KSKAEPQPEN 
R