| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3554 |
|---|
| Symbol | glnA |
|---|
| ID | 4922689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 4244487 |
|---|
| End bp | 4245896 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640165176 |
|---|
| Product | glutamine synthetase |
|---|
| Protein accession | YP_001095679 |
|---|
| Protein GI | 127514482 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTTG AATCAGTTTT ACAACAACTA GAAGAACTTG AAGTTAAGTT TGTTGATTTG
CGTTTTACCG ATACTAAAGG TAAAGAGCAG CACGTATCTA TTCCTGCTCA CCAGGTTGAT
GCCGATTTCT TTGAAGACGG TAAAATGTTC GACGGTTCAT CTATTGCTGG TTGGAAAGGC
ATTAACGAGT CAGACATGGT CCTGATGCCA GACCCAACGA CCTTCGTTCT TGACCCATTC
ACCGAAGAAA CCACTGCCCT GATCCGCTGT GACATTCTCG AGCCAGGCAC TATGACTGGT
TACGACCGCG ACCCACGCTC TATCGCTAAG AAAGCCGAAG AGTACATGGT TTCTACCGGC
ATCGCCGATA CCGTACTCAT TGGTCCTGAG CCAGAGTTCT TCCTGTTTGA TGACGTTAAG
TTCGGTACCG ACATGTCTGG CTGTTTCGTT AAGCTAGACG CTAAAGAAGC GGCTTGGAAC
TCAGGCACTC ACTACGAAGA CGGCAACACA GGTCACCGTC CATTCGTTAA AGGCGGTTAC
TTCCCAGTAG CACCAGTTGA CTCTTCACAA GATCTTCGTA GCGCCATGTG TCTGGTTCTG
GAAGAGATGG GTCAAGTGGT TGAAGCTCAC CACCACGAAG TGGCGACTGC CGGTCAAAAC
GAGATCGCGA CTCGCTTCAA CAAGCTGACT GAAAAGGCTG ACGAAATCCA GATCCTTAAG
TACGTGGTTC ACAACATGGC CCACGCTTAC GGCAAGACGG CGACCTTCAT GCCTAAGCCA
ATCGTTGGCG ACAACGGTAG CGGTATGCAC GTTCACCAAT CACTGGCTAA AGATGGTGTC
AACCTCTTCT CTGGTGACAA GTATGCGGGT CTGAGTGAGA CGGCGCTGTA CTACATCGGC
GGTATCATCA AGCACGCTCG CGCGCTGAAC GCCTTCACTA ACCCAAGCAC CAACTCGTAC
AAGCGTCTTG TGCCTCACTT CGAAGCACCA GTCATGCTGG CCTACTCGGC ACGTAACCGC
TCTGCGTCTA TCCGTATCCC AGTAGTACCA AGCCCTAAGG CACGTCGTAT CGAGACTCGC
TTCCCAGATC CAACGGCTAA CCCATACCTG GCGTTCGCTG CACTGCTGAT GGCTGGTCTT
GACGGTATCC AGAACAAGAT CCACCCAGGC GAAGCCATGG ACAAAGATCT GTACGATCTG
CCAGCGGAAG AAGCGGCTGA GATCCCACAG GTTGCGACCT CTCTTGAGAA CGCACTTGAG
AACCTGGATG CAGACCGTGA GTTCCTTACC AAAGGCGGCG TATTCTCTGA TGACTTCATC
GATTCTTACA TCGCACTGAA GACTGCAGAA GCAGAGAAAG TGGCTCGCAC CACTCACCCA
GCAGAATTTG AGCTGTACTA CAGCCTATAA
|
|---|
| Protein sequence | MSVESVLQQL EELEVKFVDL RFTDTKGKEQ HVSIPAHQVD ADFFEDGKMF DGSSIAGWKG
INESDMVLMP DPTTFVLDPF TEETTALIRC DILEPGTMTG YDRDPRSIAK KAEEYMVSTG
IADTVLIGPE PEFFLFDDVK FGTDMSGCFV KLDAKEAAWN SGTHYEDGNT GHRPFVKGGY
FPVAPVDSSQ DLRSAMCLVL EEMGQVVEAH HHEVATAGQN EIATRFNKLT EKADEIQILK
YVVHNMAHAY GKTATFMPKP IVGDNGSGMH VHQSLAKDGV NLFSGDKYAG LSETALYYIG
GIIKHARALN AFTNPSTNSY KRLVPHFEAP VMLAYSARNR SASIRIPVVP SPKARRIETR
FPDPTANPYL AFAALLMAGL DGIQNKIHPG EAMDKDLYDL PAEEAAEIPQ VATSLENALE
NLDADREFLT KGGVFSDDFI DSYIALKTAE AEKVARTTHP AEFELYYSL
|
|---|
| |