| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3546 |
|---|
| Symbol | |
|---|
| ID | 4922849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 4233641 |
|---|
| End bp | 4233862 |
|---|
| Gene Length | 222 bp |
|---|
| Protein Length | 73 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640165168 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095671 |
|---|
| Protein GI | 127514474 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.208277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAAC AAGGTTCGGC CGGCAACGTG ATTGCCGCCA TCGCAAGCTT CTTTTTCCCT
GGCCTGGGCC AATTAGTACA AGGACGCATC CTGGCGGCAC TCCTCTTCTG TGTCGTCACC
ATAGTCGGCT ACGCCCTGTG GTGGTTGATC GTCCCCGCTA TCATAGGCGG TATCGCTCAC
CTGTGGAGCA TTATAGACGC CGCTAAATTC AAGGCCGACT AA
|
|---|
| Protein sequence | MSQQGSAGNV IAAIASFFFP GLGQLVQGRI LAALLFCVVT IVGYALWWLI VPAIIGGIAH
LWSIIDAAKF KAD
|
|---|
| |