| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3526 |
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| Symbol | |
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| ID | 4922859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4212835 |
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| End bp | 4214076 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640165148 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase II |
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| Protein accession | YP_001095651 |
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| Protein GI | 127514454 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.201321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACA AGACTCGACG CGTAGTGATC ACCGGTGCCG GAGGCGTCAC CGCCCTGGGC
CACGACTGGC CCAGCATCGC CCAGCGCCTA CAGACAATGC AAAACTGTGT GCAGCGCATT
GACGAGTGGG ACAGGTTCGA CGGACTCAAC ACACGTCTGG CCGCGCCGGT AACAGACTTT
GAGAAACCGG CGCACTATTC GCGCAAGAAG ATCCGCTCCA TGGGGCGCGT CTCTGTCATG
GCGGCCTGGG CCAGCGAGAA GGCGCTGATG GATGCCGGCC TACTGGACGA TCCCATAGTG
ACCTCAGGTG CCATGGGCAT CGCCTACGGC TCCTCCACCG GCAGTACGGA TCCCATCATC
GCCTTCGGCG ACATGCTCAA AGAGGGCGAC ATGTCTGGGG TCACGGCCAC CAGCTATATC
CGCATGATGG CCCATACCAC TGCGGTCAAT GTCGGTGTCT TCTTCGGCCT CAAGGGCCGG
GTGCACACCA CCAGCAGCGC CTGTACCTCG GGCAGCCAGG GTATTGGCTA CGCCTATGAG
GCGATCAAAT ATGGTCAGCA GGATCTCATG TTGGCCGGCG GCGCCGAGGA GCTCTGCCCC
ACCGAGGCCG TGGTATTCGA TACCCTGTTT GCTACCAGCA CCAAGAATGA TACGCCAAGC
GAGACACCAA GCCCCTTCGA TCGTGACAGA GACGGCCTGG TGATCGGCGA AGGCGCCTGC
ACCCTGGTAC TGGAAGAGCT GGAACACGCC AAGGCCCGCG GCGCTAAGAT CTACGCCGAG
TTAGTGGGTT TCGGCACCAA CTCTGATGGC CTGCATGTGA CTCAGCCTAA CGCCGAGACC
ATGGAGGTGG CGATTCGCCT GGCCCTGAAA GATGCCGACC TGGACGCCGA CAAGATAGGC
TATGTCAATG CCCATGGCAC AGCCACGGAT CGCGGCGATA TCGCCGAAAC ACAGGCCACC
CAGGCGGTAT TTGGCGAGCG CATGCCCATC TCCTCCCTCA AGAGCTACAC GGGCCATACC
TTAGGCGCGT GCGGCGCACT GGAGGCCTGG CTCAGTGTCG AGATGATGAA TGCCGGCTGG
TTTGCCCCCA CCCTCAACCT CAAGCATATC GATCCCGCCT GTGGTCAACT GGACTACATC
AAGGATGAGG TTCGCAAACT CACTACCGAC TATGTGATGA GCAACAACTT CGCTTTCGGC
GGTATCAACA CCTCGCTGAT CTTCAAGCGC TGGCAAGACT AA
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| Protein sequence | MNNKTRRVVI TGAGGVTALG HDWPSIAQRL QTMQNCVQRI DEWDRFDGLN TRLAAPVTDF
EKPAHYSRKK IRSMGRVSVM AAWASEKALM DAGLLDDPIV TSGAMGIAYG SSTGSTDPII
AFGDMLKEGD MSGVTATSYI RMMAHTTAVN VGVFFGLKGR VHTTSSACTS GSQGIGYAYE
AIKYGQQDLM LAGGAEELCP TEAVVFDTLF ATSTKNDTPS ETPSPFDRDR DGLVIGEGAC
TLVLEELEHA KARGAKIYAE LVGFGTNSDG LHVTQPNAET MEVAIRLALK DADLDADKIG
YVNAHGTATD RGDIAETQAT QAVFGERMPI SSLKSYTGHT LGACGALEAW LSVEMMNAGW
FAPTLNLKHI DPACGQLDYI KDEVRKLTTD YVMSNNFAFG GINTSLIFKR WQD
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