Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3523 |
Symbol | |
ID | 4922856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4210315 |
End bp | 4211520 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640165145 |
Product | 3-oxoacyl-(acyl carrier protein) synthase I |
Protein accession | YP_001095648 |
Protein GI | 127514451 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGA TAGCTATCAC CCACCTAGGA TTATGCACCC CATTGGGGGA CGATCCCCAG ACCGTCTTAC GCCGCCTACT CGATGGCGAT ACTCAGGGCA TGAGGTGGCG TGACGACCTG ATCCCTGACA GCCAGGTATT GGTGGGAATG GTCACCACAG AGTTGCCGAG CATAGCACCC GAATTACAAA GATTCGACTG TCGTAACAAT CAGTTACTCC AGCGCGCTGC CGAGCAGATC GCCCCGGCGG TCGAGGCGGC CAAGACCCAA TACGGCGCAG ATCGCATAGG TATAGTGCTA GGCACTAGCA CCTCAGGGAT CGCCAGGGGC GAGAAGGCAC TGGCCTACCG CGCCGAGCAT GGTGTATTGC CCGCCGATTA CCTCTACTCC AAGCAGGAGC TAGGTAACAG CTGTGACTTT CTGCAGCACT ATTTCGACCT CACGGGCCCC TGCTATACGG TATCGACCGC CTGCTCATCC AGCGCCAAGG TATTCGCCAG CGCCAAGCGC CTGCTCCAGG CCGGCGTCTG CGACATGGTG ATCGTCGGCG GCGCCGACAG CCTGTGTAAG CTGACCCTGA ACGGCTTCCA CTCGCTGGAA TCTGTCTCCA AGGCCCATTG CCAACCCTTT AGCCGTAACC GCGACGGCAT CAATATCGGT GAAGGCGCAG CCCTGTTTAC CCTAACCTTA GGCGAGGCCG AGCTGATGCT CGCGGGTGTG GGGGAGTCCA GCGACGCCCA CCATATCTCT TCACCCCATC CAGAGGGCGA TGGCGCCGTG GTCGCCATCG AGATGGCACT CAAGGATGCA GCCATCGCTC CGTCACAGGT GGGCTACATC AACCTGCACG GCACGGCGAC CATAAAGAAT GATGCCATGG AGAGTCGGGC CCTGCTAAAG GTGTTCGGCG AGCAACTACC ACCAGTGAGT TCTACTAAGC CGCTCACCGG TCATGCCTTG GGCGCCGCCG GTGCATTGGA GGCGGCCTTC TGTCTGCTGA TCCTATCAGG TCCAAATAAA GATCACGGGC TGCCACCCCA GGTGGGAGAC GGCCTGTGGG ATGATGACAA TCCGACGCTG CCCTTCGTAT CACAGGGGCA CAGCACTCGG CCTGAGAATG CCAGGCTCGA ATATGTCATG AGCAACTCCT TTGCCTTTGG CGGCAGCAAT GCCAGCGTCA TCTTCTGCCG GGGAGCCAAG CAATAA
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Protein sequence | MTQIAITHLG LCTPLGDDPQ TVLRRLLDGD TQGMRWRDDL IPDSQVLVGM VTTELPSIAP ELQRFDCRNN QLLQRAAEQI APAVEAAKTQ YGADRIGIVL GTSTSGIARG EKALAYRAEH GVLPADYLYS KQELGNSCDF LQHYFDLTGP CYTVSTACSS SAKVFASAKR LLQAGVCDMV IVGGADSLCK LTLNGFHSLE SVSKAHCQPF SRNRDGINIG EGAALFTLTL GEAELMLAGV GESSDAHHIS SPHPEGDGAV VAIEMALKDA AIAPSQVGYI NLHGTATIKN DAMESRALLK VFGEQLPPVS STKPLTGHAL GAAGALEAAF CLLILSGPNK DHGLPPQVGD GLWDDDNPTL PFVSQGHSTR PENARLEYVM SNSFAFGGSN ASVIFCRGAK Q
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