| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3503 |
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| Symbol | |
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| ID | 4923055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4190118 |
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| End bp | 4191050 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640165125 |
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| Product | CaCA family Na(+)/Ca(+) antiporter |
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| Protein accession | YP_001095628 |
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| Protein GI | 127514431 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCACCC CGCTAGCCCT TATCGCTGGT CTGCTCATCC TTATTCTTGG CGCCGAATCC
CTGGTGCGTG GCGCCAGCGC GCTGGCCCTA AAACTGGGCG TCACCCCGCT GATCATCGGC
CTCACCATAG TCGCCTTCGG CACCAGCGCC CCCGAGCTGG CGGTGAGCCT CAAGTCGGCC
CTGGCCGGCA ACTCTGGCAT CGCCCTGGGC AATGTCGTCG GCTCCAACAT CGCCAACATA
GGCCTAATCC TCGGCCTGAC GGCCCTGGTG CGCCCAATCG GTGTGCAATC TATGATGGTC
AAGCGCGACA TTCCGCTGAT GCTGTTTGCT AGCCTGCTCT TCTGGGGGCT GATCAGCGAC
GGTAGCCTCA GCCAACTGGA CGGTGCCCTG CTCTGCTCCA TGCTGATCGC CTATCTGGGG
ATGAACTACC TGTTCGATAA GCAGCAGGCC GATACCGAGT CGATGGAGCT CAAGCCGCTC
GCGCCTCTGC TGGCCGTGGT GCTACTCCTC GTTGGTATCG CCATGTTGGT CGGCGGCGGC
ATACTCTTTG TCGACGGCGC CGTGGCCCTC GCCAGACAGC TGGGAATGAG CGAGCTACTT
ATCGGCCTGA CCATCATCGC CATAGGTACC AGCATGCCAG AGCTGATCAC CTCACTGGTG
GCCGCCAGAC GCGGCGAGAG CGATATCGCC ATCGGCAACC TGGTGGGCTC TAACCTGTTT
AATATCCTGG GGATATTGGG GATAACCGCC ATTATCCACC CCATCACCGC CAGCGTGCCC
AAGCTGGACA TGTTGGTGAT GGTTTCGCTG GCACTGCTGC TTCTGCCTCT GGCCTGGAGC
GGCCTGCGCG TGGGCCGACG TGAAGGCGCC TTGCTGCTGC TCTGCTACCT CGTCTACCTG
GGCTATTTGA TCCTCTCCGC CCAATCCCTA TGA
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| Protein sequence | MFTPLALIAG LLILILGAES LVRGASALAL KLGVTPLIIG LTIVAFGTSA PELAVSLKSA
LAGNSGIALG NVVGSNIANI GLILGLTALV RPIGVQSMMV KRDIPLMLFA SLLFWGLISD
GSLSQLDGAL LCSMLIAYLG MNYLFDKQQA DTESMELKPL APLLAVVLLL VGIAMLVGGG
ILFVDGAVAL ARQLGMSELL IGLTIIAIGT SMPELITSLV AARRGESDIA IGNLVGSNLF
NILGILGITA IIHPITASVP KLDMLVMVSL ALLLLPLAWS GLRVGRREGA LLLLCYLVYL
GYLILSAQSL
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