Gene Shew_3486 details

Gene Information

• Locus tag: Shew_3486
• Symbol: folE
• ID: 4923164
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella loihica PV-4
• Kingdom: Bacteria
• Replicon accession: NC_009092
• Strand: +
• Start bp: 4172245
• End bp: 4172889
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640165108
• Product: GTP cyclohydrolase I
• Protein accession: YP_001095611
• Protein GI: 127514414
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0302] GTP cyclohydrolase I
• TIGRFAM ID: [TIGR00063] GTP cyclohydrolase I

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCATTAA GTGAAGCAGC AAAGCAGGTG CAAACTGCAT TATTAGAGCG TGGTCTTGAG 
ACGCCCATGG TCCCGTGCGG ACTGAGTAGC GAGGCGCGCA AAGAGAAGAT TGAGCACCAT 
ATGCGCGAGA TCTTAACCTT AATGTCACTG GATCTGCGCG ACGACAGCCT GGTCGAGACC 
CCTAAGCGTA TCGCCAAGAT GTATGTGGAT GAGATCTTCT CGGGCCTGGA CTACGAGAAC 
TTTCCCAAGA TCACGGTTAT CGAAAACAAG ATGGGCTTCG ATGAGATGGT CAAGGTCAAC 
GACATCAGCC TCACCAGCAC CTGTGAGCAC CACCTGGTGA CCATAGACGG CGTCGCTACC 
GTGGCCTACC TGCCGCGCAA AAACATCATA GGCCTGTCTA AGATCAACCG TATCGTGCGC 
TTCTTTGCCC AGCGCCCTCA GGTGCAAGAG CGCCTAACAC AACAGGTATT GGTGGCGCTA 
CAGACACTGC TTGAGACCAA AGATGTAGCG GTCAAGATGG ATGCGGTGCA TTACTGCGTC 
AAATCACGCG GCGTGATGGA CTCTACCAGC ACCACGACCA CCACGGCCCT GGGCGGCATC 
TTCAAGTCAA ACCCAGCCAC CCGCGCCGAG TTCCTAAGCA ATTAA 

 

Protein sequence

MALSEAAKQV QTALLERGLE TPMVPCGLSS EARKEKIEHH MREILTLMSL DLRDDSLVET 
PKRIAKMYVD EIFSGLDYEN FPKITVIENK MGFDEMVKVN DISLTSTCEH HLVTIDGVAT 
VAYLPRKNII GLSKINRIVR FFAQRPQVQE RLTQQVLVAL QTLLETKDVA VKMDAVHYCV 
KSRGVMDSTS TTTTTALGGI FKSNPATRAE FLSN