16 homologs were found in PanDaTox collection
for query gene Shew_3477 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009092  Shew_3477  hypothetical protein  100 
 
 
179 aa  351  2.9999999999999997e-96  Shewanella loihica PV-4  Bacteria  normal  0.310415  normal 
 
 
-
 
NC_008322  Shewmr7_0363  hypothetical protein  40.8 
 
 
172 aa  140  9.999999999999999e-33  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3766  hypothetical protein  42.61 
 
 
172 aa  139  1.9999999999999998e-32  Shewanella sp. ANA-3  Bacteria  normal  0.474482  normal  0.469864 
 
 
-
 
NC_008321  Shewmr4_3593  hypothetical protein  41.48 
 
 
172 aa  139  3e-32  Shewanella sp. MR-4  Bacteria  normal  0.272187  normal 
 
 
-
 
NC_008700  Sama_0331  hypothetical protein  42.53 
 
 
177 aa  133  1.9999999999999998e-30  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000143905  normal 
 
 
-
 
NC_009438  Sputcn32_0466  hypothetical protein  40.23 
 
 
172 aa  128  3e-29  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.0083717  n/a   
 
 
-
 
NC_009665  Shew185_0380  hypothetical protein  40.23 
 
 
172 aa  124  6e-28  Shewanella baltica OS185  Bacteria  hitchhiker  0.0074269  n/a   
 
 
-
 
NC_009997  Sbal195_0392  hypothetical protein  40.23 
 
 
172 aa  124  7e-28  Shewanella baltica OS195  Bacteria  normal  0.0144961  hitchhiker  0.000428302 
 
 
-
 
NC_011663  Sbal223_0406  hypothetical protein  40.23 
 
 
172 aa  124  7e-28  Shewanella baltica OS223  Bacteria  hitchhiker  0.00038042  hitchhiker  0.0000000000953949 
 
 
-
 
NC_009052  Sbal_0381  hypothetical protein  41.48 
 
 
179 aa  119  3e-26  Shewanella baltica OS155  Bacteria  unclonable  0.000000000537441  n/a   
 
 
-
 
NC_004347  SO_4244  hypothetical protein  38.51 
 
 
172 aa  116  1.9999999999999998e-25  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_3833  hypothetical protein  32.14 
 
 
170 aa  98.2  6e-20  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_1949  hypothetical protein  35.34 
 
 
150 aa  77.4  0.00000000000009  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1976  hypothetical protein  35.34 
 
 
150 aa  77.4  0.00000000000009  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0243913 
 
 
-
 
NC_011071  Smal_1103  hypothetical protein  32.28 
 
 
197 aa  62.8  0.000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2179  hypothetical protein  29.21 
 
 
169 aa  41.2  0.008  Ralstonia solanacearum GMI1000  Bacteria  normal  0.455943  normal 
 
 
-
 
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