Gene Shew_3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3467 
Symbol 
ID4922469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4150539 
End bp4151036 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content56% 
IMG OID640165089 
Producthypothetical protein 
Protein accessionYP_001095592 
Protein GI127514395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0153094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.215425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCT ATCTTCTGGC TGCAAGCATA GCATTACTGC CGATATCGGC CTTCGCCGAC 
CCGAGTGCGA CGCAAGTGGT GAAAGGGTTT ATCGACGCCT ATAACCAGCA CAGTGTCGAG
AAAATGCTGA CCCATGTGTC GGACGATGTG CGCTGGATGC ATATCTCTGG CAGCAAGATA
GAGGTTGAAA CCTCGGATAA GGCGCAATTT GGCGCCGCCA TGACAGACTA TTTCGAGACC
CTCACCGGCG CCCAGGCCAC CATACTCGAG CTGATCGACT CTTCTCACTA TGTCAGCACG
GTAGAGCGTG TGACCTGGGA GAACGATGGT GAGCAACTCA GCCAGTGCAG CGTAGGTAAT
TTCCGCGTGC AGGACGGTAA GATAGCCGAG TTTTGGTATC TGCCCGCCCA CGCCTGTGAC
GAGCAGTTAG AGGCCGCCGA GCAAGTCGAG TCTGAGCCAG AGCCAGAGCT CGATCCGAAC
CAGCCTAACC AGCAGTAG
 
Protein sequence
MKPYLLAASI ALLPISAFAD PSATQVVKGF IDAYNQHSVE KMLTHVSDDV RWMHISGSKI 
EVETSDKAQF GAAMTDYFET LTGAQATILE LIDSSHYVST VERVTWENDG EQLSQCSVGN
FRVQDGKIAE FWYLPAHACD EQLEAAEQVE SEPEPELDPN QPNQQ