Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3372 |
Symbol | |
ID | 4924215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4021340 |
End bp | 4022383 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640164984 |
Product | arginase/agmatinase/formiminoglutamase |
Protein accession | YP_001095497 |
Protein GI | 127514300 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.537217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCC TAATTCCATT TACAGCCGAG CGTTGCCAGG GCTTTGTCGC CAAGCGTGAG GGCGAAACCA AGATTGGCCA GACAATTCAT TGTTATGAGG GCAAAACGCC ACTCGGCGAG CAGCTGGCGA GTGCCAAGGC CGACGGGGTG CGCTTTGTCA TCCTTGGGAT AGGCGAAGAT ATTGGCCCCA GGGCCAACCT GGGACGCGGC GGCGCCGTCG ATGGTTTCGA GGCCGCCATG GCGCAGTTCT GCAACTTCCA ATCGAACCAG TTTCTCGACG GTGGCCACTG CCTGGTGCTG GGGCAGATCG CCACGGACGA TCTACAGCTG CCAGAGGGCA GCAGCGCACA GGCCCTGAGA GAGAATGTCG ACAAGCTAGA TGAGCGGGTG ATCGAGATAG TCGGCGAGAT CATGGCGGCC GGCCTGGAGC CGATTGTGAT CGGCGGCGGG CATAACAACG CATATGGCCT CTTGATGGCC ACCAAGCAGG CGACAGGTAA AATGGTAGCG GCAGTTAACC TGGATCCTCA CTCAGACTTT CGCCCGCGAG AAGGCCGCCA CAGCGGCAAT GGTTTTAGCT ATGCCGCCGC CAGCGGCGCC CTGGGACACT ATCATGTGCT GGGGCTACAT GAGCTGAAAA ACAGTCAGCA GACCCTGGAG CAGCTAACGG CCTTCGGCGG CAAGTGGCAC ACGCTACAGG CCATCTGGGT CAGACGCGAG ACAAGCCTGG AACAGGCGCT CAAGGCGATA GTCGAGGACC TCAACGCCAG CGATCTGCCG GTAGCACTGG AGCTAGATCT CGACGCCATC ACTAACATGC CCAGCAGCGC CTCGACCGCG GCGGGGATTC CCCTGCTCGA CGCCCTCTAT TATGTGAATC AGGTGGCCAG CAAGACGCCG GCCGCCTACC TGCATCTGGC GGAGGCGGCG CCAAGCTGTC ACGTGGCGGG TGTGGAGGCC GGTCGTCGGG AGACGGGCCA GAGCATCGGC GAGCTGATCT ACGCCTATAT CCAGGGACGA CTGGCACAGC ATCCCCTGGG GTAA
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Protein sequence | MQTLIPFTAE RCQGFVAKRE GETKIGQTIH CYEGKTPLGE QLASAKADGV RFVILGIGED IGPRANLGRG GAVDGFEAAM AQFCNFQSNQ FLDGGHCLVL GQIATDDLQL PEGSSAQALR ENVDKLDERV IEIVGEIMAA GLEPIVIGGG HNNAYGLLMA TKQATGKMVA AVNLDPHSDF RPREGRHSGN GFSYAAASGA LGHYHVLGLH ELKNSQQTLE QLTAFGGKWH TLQAIWVRRE TSLEQALKAI VEDLNASDLP VALELDLDAI TNMPSSASTA AGIPLLDALY YVNQVASKTP AAYLHLAEAA PSCHVAGVEA GRRETGQSIG ELIYAYIQGR LAQHPLG
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