Gene Shew_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3372 
Symbol 
ID4924215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4021340 
End bp4022383 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content61% 
IMG OID640164984 
Productarginase/agmatinase/formiminoglutamase 
Protein accessionYP_001095497 
Protein GI127514300 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.537217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCC TAATTCCATT TACAGCCGAG CGTTGCCAGG GCTTTGTCGC CAAGCGTGAG 
GGCGAAACCA AGATTGGCCA GACAATTCAT TGTTATGAGG GCAAAACGCC ACTCGGCGAG
CAGCTGGCGA GTGCCAAGGC CGACGGGGTG CGCTTTGTCA TCCTTGGGAT AGGCGAAGAT
ATTGGCCCCA GGGCCAACCT GGGACGCGGC GGCGCCGTCG ATGGTTTCGA GGCCGCCATG
GCGCAGTTCT GCAACTTCCA ATCGAACCAG TTTCTCGACG GTGGCCACTG CCTGGTGCTG
GGGCAGATCG CCACGGACGA TCTACAGCTG CCAGAGGGCA GCAGCGCACA GGCCCTGAGA
GAGAATGTCG ACAAGCTAGA TGAGCGGGTG ATCGAGATAG TCGGCGAGAT CATGGCGGCC
GGCCTGGAGC CGATTGTGAT CGGCGGCGGG CATAACAACG CATATGGCCT CTTGATGGCC
ACCAAGCAGG CGACAGGTAA AATGGTAGCG GCAGTTAACC TGGATCCTCA CTCAGACTTT
CGCCCGCGAG AAGGCCGCCA CAGCGGCAAT GGTTTTAGCT ATGCCGCCGC CAGCGGCGCC
CTGGGACACT ATCATGTGCT GGGGCTACAT GAGCTGAAAA ACAGTCAGCA GACCCTGGAG
CAGCTAACGG CCTTCGGCGG CAAGTGGCAC ACGCTACAGG CCATCTGGGT CAGACGCGAG
ACAAGCCTGG AACAGGCGCT CAAGGCGATA GTCGAGGACC TCAACGCCAG CGATCTGCCG
GTAGCACTGG AGCTAGATCT CGACGCCATC ACTAACATGC CCAGCAGCGC CTCGACCGCG
GCGGGGATTC CCCTGCTCGA CGCCCTCTAT TATGTGAATC AGGTGGCCAG CAAGACGCCG
GCCGCCTACC TGCATCTGGC GGAGGCGGCG CCAAGCTGTC ACGTGGCGGG TGTGGAGGCC
GGTCGTCGGG AGACGGGCCA GAGCATCGGC GAGCTGATCT ACGCCTATAT CCAGGGACGA
CTGGCACAGC ATCCCCTGGG GTAA
 
Protein sequence
MQTLIPFTAE RCQGFVAKRE GETKIGQTIH CYEGKTPLGE QLASAKADGV RFVILGIGED 
IGPRANLGRG GAVDGFEAAM AQFCNFQSNQ FLDGGHCLVL GQIATDDLQL PEGSSAQALR
ENVDKLDERV IEIVGEIMAA GLEPIVIGGG HNNAYGLLMA TKQATGKMVA AVNLDPHSDF
RPREGRHSGN GFSYAAASGA LGHYHVLGLH ELKNSQQTLE QLTAFGGKWH TLQAIWVRRE
TSLEQALKAI VEDLNASDLP VALELDLDAI TNMPSSASTA AGIPLLDALY YVNQVASKTP
AAYLHLAEAA PSCHVAGVEA GRRETGQSIG ELIYAYIQGR LAQHPLG