| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3312 |
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| Symbol | |
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| ID | 4923950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3953111 |
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| End bp | 3953398 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640164924 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001095437 |
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| Protein GI | 127514240 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000143782 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.992146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAATAA ACCTGACTGG GCACCATATC GAGATCACCC AATCTCTACG AAGCTACATC
GAAGAGAAAT TCACAAAGCT TGAACGTCAT TTCGATCAGA TCAATAATGT GCACGTTGTA
TTAAATGTCG AAAAGTTGCA ACAGAAGGTT GAGGCAAAGT TACATCTCCG TGGCGGAGAA
GTGTTCGCAA CATCCGAACA TGCGGACATG TATGCCGCGA TAGACTCCCT GATTGACAAA
CTCGATCGTC AGGTCATTAA ACACAAAGAG AAGCTTACTA AACATTAA
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| Protein sequence | MQINLTGHHI EITQSLRSYI EEKFTKLERH FDQINNVHVV LNVEKLQQKV EAKLHLRGGE
VFATSEHADM YAAIDSLIDK LDRQVIKHKE KLTKH
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