Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3280 |
Symbol | |
ID | 4921116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3925049 |
End bp | 3925486 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640164892 |
Product | hypothetical protein |
Protein accession | YP_001095405 |
Protein GI | 127514208 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0498966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00021617 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACATCA AGATGAGGCA TAGGATGAGC AGCCCATTAG GCGGATTTTA TCTCGCGGCC CAACAACGAA GAATACAAGC CCTGCAGCGC CAGCGCAGCA CACCTAAGTG CCGCCTCAAC GTCACCCTCA CAGGCGACGA CCGACCGCTT ATTGCCCACT GCCTCGCCCT CAAGCCAGGC GTGAGTGAAC TTGGCAATCA AACAGTGAAT ATCCGGCTTT GCGCAAGCTT CACCCCGACG GGCCTGCTTA AGGTGGTGAG TGACATCTAC CTATGCGCAG CGGATGAACC TCGCCATATC GGCACGCAAG AACTCTATCT AAGCCCGAAT GACCCCGTGA CTAGCCTGGT AGCAGGCAAC CCTCACTATC GGCTAACGCT GATGGCCACT CAGATAGCAC AGGATCATAC CAAGCCGAAT AGCGGCGAGA GCAGCTAG
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Protein sequence | MDIKMRHRMS SPLGGFYLAA QQRRIQALQR QRSTPKCRLN VTLTGDDRPL IAHCLALKPG VSELGNQTVN IRLCASFTPT GLLKVVSDIY LCAADEPRHI GTQELYLSPN DPVTSLVAGN PHYRLTLMAT QIAQDHTKPN SGESS
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