Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3261 |
Symbol | |
ID | 4921294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3899524 |
End bp | 3900180 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640164873 |
Product | thiopurine S-methyltransferase |
Protein accession | YP_001095386 |
Protein GI | 127514189 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00154958 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00386199 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAACCCA GTTTTTGGCA CGACAAATGG GCCTCACAGC AGATAGGTTT TCATCTCGAC GAGGTCAACG CCCTTCTTAT CGACTATTGG CCGCAGCTCG AGTTGGCTGC CGGCAGCCAG GTCTTCGTTC CCCTGTGTGG TAAAACCTTA GATCTCTGTT ATCTGGCCGA GCAGGGGCTG GAGGTGATCG GCTGTGAGCT GAACCAGAGC GCGGTGGAGC AGTTCTTCAG CGACAATGAG CTGCCGGTCG AGCGCCAATC GAGCGGCGAG CATGAGTGTT ACCGCACCGA GCAGGTGAGC ATCTACCAGG GGGATCTGTT CCGTCTGCCA AAGGAACCCC TGGAGGCGGT GAGCGGCTTC TATGACAGGG CGGCGCTGAT CGCCTGGCCC CCAGAGATGC GCCAGCAGTA TGTGGAGTGC CTGGCCGGGT TATTGCCGCC TAAGAGCATA GGCTTGCTGA TCACCTTAGA CTATCCCCAG GAAGCGCTAA ACGGCCCGCC ATTTGCGGTA TCCGATGCCT GGATCCAGGA GCATATGAGC CCCTATTTCG AGATCGAGTG CCTCAGCACC CAGGATGTGC TGGCCGAAAA CCCTAGGTTC GTGAAGAAGC AGGTGCCCTG GCTGACCGAG TCTGTCTATC GTCTGGTGAG GCGTTAA
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Protein sequence | MQPSFWHDKW ASQQIGFHLD EVNALLIDYW PQLELAAGSQ VFVPLCGKTL DLCYLAEQGL EVIGCELNQS AVEQFFSDNE LPVERQSSGE HECYRTEQVS IYQGDLFRLP KEPLEAVSGF YDRAALIAWP PEMRQQYVEC LAGLLPPKSI GLLITLDYPQ EALNGPPFAV SDAWIQEHMS PYFEIECLST QDVLAENPRF VKKQVPWLTE SVYRLVRR
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