Gene Shew_3261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3261 
Symbol 
ID4921294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3899524 
End bp3900180 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content58% 
IMG OID640164873 
Productthiopurine S-methyltransferase 
Protein accessionYP_001095386 
Protein GI127514189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00154958 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00386199 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAACCCA GTTTTTGGCA CGACAAATGG GCCTCACAGC AGATAGGTTT TCATCTCGAC 
GAGGTCAACG CCCTTCTTAT CGACTATTGG CCGCAGCTCG AGTTGGCTGC CGGCAGCCAG
GTCTTCGTTC CCCTGTGTGG TAAAACCTTA GATCTCTGTT ATCTGGCCGA GCAGGGGCTG
GAGGTGATCG GCTGTGAGCT GAACCAGAGC GCGGTGGAGC AGTTCTTCAG CGACAATGAG
CTGCCGGTCG AGCGCCAATC GAGCGGCGAG CATGAGTGTT ACCGCACCGA GCAGGTGAGC
ATCTACCAGG GGGATCTGTT CCGTCTGCCA AAGGAACCCC TGGAGGCGGT GAGCGGCTTC
TATGACAGGG CGGCGCTGAT CGCCTGGCCC CCAGAGATGC GCCAGCAGTA TGTGGAGTGC
CTGGCCGGGT TATTGCCGCC TAAGAGCATA GGCTTGCTGA TCACCTTAGA CTATCCCCAG
GAAGCGCTAA ACGGCCCGCC ATTTGCGGTA TCCGATGCCT GGATCCAGGA GCATATGAGC
CCCTATTTCG AGATCGAGTG CCTCAGCACC CAGGATGTGC TGGCCGAAAA CCCTAGGTTC
GTGAAGAAGC AGGTGCCCTG GCTGACCGAG TCTGTCTATC GTCTGGTGAG GCGTTAA
 
Protein sequence
MQPSFWHDKW ASQQIGFHLD EVNALLIDYW PQLELAAGSQ VFVPLCGKTL DLCYLAEQGL 
EVIGCELNQS AVEQFFSDNE LPVERQSSGE HECYRTEQVS IYQGDLFRLP KEPLEAVSGF
YDRAALIAWP PEMRQQYVEC LAGLLPPKSI GLLITLDYPQ EALNGPPFAV SDAWIQEHMS
PYFEIECLST QDVLAENPRF VKKQVPWLTE SVYRLVRR