| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3215 |
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| Symbol | |
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| ID | 4921573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3832865 |
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| End bp | 3835471 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640164825 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001095340 |
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| Protein GI | 127514143 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGTGC CAGGACTATC GCGTCAAGCG GCGGCCGAGC GGCTGGAACA ATATGGGCCC
AATTGCCTGC CCAAGCCGGC AAGACTCAGC TTCATCCGCC TGTTTATTCT GCAGTTTAAG
AGCGCCTTCA TCTATGTGCT GCTCGCAGCC TTCATCGCCT GTCTGCTGCT CGGCCAGATC
CTCAACGCCA TCTTCATCTT CGCCGTGCTC ATGCTCAACG CCATCATAGG CACAGTGCAG
GAATACTCGG CCCAGCAGGC CGCCGACGCC CTGAGCAAGA TGGTGCCCTC CCAGACCAAA
GTGATCCGCG ACGGCCACCC CAAGATGGTG GACAGCCTGA GCCTGGTACC CGGCGACTAT
ATTCTGCTGT CCAACGGCGA TCGCATCGGC GCCGATATCA AAATCGAAAA GCATAACCAG
TTTAAGGTGG ACGAATCGGC CCTCACTGGC GAGTCTGTGG CGGTCAATAA GACAGATCTC
GCCTTCGCCG GCACCCTGGT CACCCATGGA CGGGCCGAGG GCGAGGTGAT CGCCACCGGC
GCCCGCACCC AGATAGGTCA GATAGCCGAT CTGGTTCGCC AGGGCGGTAG CGCCAAGCCA
CCGCTGATGC AGCGTATCGA GCGCTTCACC CTGATCATCG CCATAGCCAC CTTAATCATC
ATCGCCCTCA TCTTCGGCCT GACATTGCTG CGGGGCGCGG ATCTCTCCCA GGTGTTCCTG
CTGGGGGTCG CCTTGGCGGT CTCAGCTATT CCCGAGGGGC TACCTGCGGC CATCACGGTG
GCCCTGGCCA TAGGTATGAA GCGGATGTCC CAGGCCAATG TGATAGTGCG CAAGCTGGTG
GCGGTGGAGT CTCTCGGCTC CTGCACCTAT ATCGCCTCGG ATAAGACGGG CACCTTGACG
GTCAACGAGA TGACCATCAG CCAGATCAGC CTGCTGTCGG GTGAGCGCTA TCACGTGGCG
GGCACAGGGC TGACGCCCAC AGGCCTGGTG CACAAGCATG GCCATGGGGT GCCAGTATCA
ACCGCACGGG ATCCCGAGCT GCACCGCCTT GCCCTCACCG GCGTGCTGGC CAACGAGGCC
CACCTTAGCT TCGAGGCCAA GCAGAGCCAT GGCGATCAGA TGCATGCAGA CGGCGACGGG
GTCGATCTCG CCTTCCTAGC TTTGGGCTAT AAGCTCAATC TCGAGATGGA CAAAGCCAAG
CAGCCACCGC AGGAGCAGCT GTTTGCCTAC GAGTCGGAGA ACCAGTTCAG CGCCAGCATC
AACCAGATAG AGGGGCGCTC CGTCATCTCG GTCAAGGGCG CGGTGGAGAA GCTGCTCACC
ATGTGTCAGC TGGATGCGCA GCAGACTCAG GCTGTGTTGG ATGAGACCCA CTGGCTGGCG
CGCCACGGCT ACCGGGTGTT GGCGCTCGCC AGCGGCGAGG TCAGCGACCC ACACCATCCA
TTGGCAGATC TGGATTTTCT GGGTTTAGTA GCCATGAGCG ATCCCCTGCG GGAAGATGCC
ATCGAGGCAG TGGCCCTGTG TCAGCAGGCA CAGATCAAGG TGGCGATGAT CACCGGCGAC
CACCCTGTGA CCGCCCTGGC GCTGGCGCGT CAGCTCAAGC TGGCCAACGA CCAGGATGGG
GTGATCACCG GCGAGCAGCT CACCCAGGTC CAGCAGCAGA GTCTGGCCGA GTTCGATCAT
CTCATCGCCA GCCACAGGGT ATTTGCCCGG GTACAGCCCA GGCAGAAGAT GGAGATCACC
GAGTCCTTGA TCCGCCAGGG CGAGTTTGTC GCCATGACGG GTGACGGGGT CAACGACGCC
CCGGCGCTGA AGCATGCCCA TGTGGGCATT GCCATGGGCC TCAAGGGCAC GGATGTGGCC
CGCGAGAGCG CCGATCTTGT GCTGACCGAC GACAGGTTCA GCTCTATAGT CAAGGGGATC
ATCGAGGGGC GCATCGTCTA CAACAATATC CGTAAGGTGA TCTACCTGCT GATCAGTACC
GGGGCCGCCG AGCTGCTGCT GTTTATCTTA AGCGTGCTGT TTGCTCAGCC TATCCCACTG
TTTCCGCTGC AGATCCTCTG GCTTAACCTG GTCACCAACG GCGTGCAGGA TGTGGCGCTG
GCCTTCGAGC CCGGCGAAGG CCACGAGATA GACCAGCCAC CGCGCCGCCC CAGCGAGCCC
ATCTTCGATC GCCTCATGCT GGAGCGGCTG ATCGTCAGCG CCCTGTGGAT GGGCATAGTC
GCCTTCGGCC TCTTCTCCCT GGTGCTGGCC ATTGGCAGCA GCGAGAACGA CGCCCGTAAC
CTCACCCTGA TGCTGATGGT GCTGTTCGAA AACGTGCATG CCCTCAACAG CCGCTCGGAG
CGTAACTCGC TGCTGCGTAT GCCCGTGCTG AGCAATCCGC TGCTGCTGTT TGGCATCATA
CTGGCTCAGG GAATCCATAT AGGCGCCAGT TATACGCCCG GCTTGAGCCA GGCGCTGGGC
ATTAGCCCTA TCGGGCTGGG ACAATGGCTG ATGCTGCTGA GCGCCGCCTC GACCCTGTTA
TTCATCGATG AATACCATAA GCGTCTCTGG CGTCAGCAGC ACAAACCTAA GGTTAGGCAG
GCAACAGCTG ATCGTCAGCT GGAATAA
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| Protein sequence | MAVPGLSRQA AAERLEQYGP NCLPKPARLS FIRLFILQFK SAFIYVLLAA FIACLLLGQI
LNAIFIFAVL MLNAIIGTVQ EYSAQQAADA LSKMVPSQTK VIRDGHPKMV DSLSLVPGDY
ILLSNGDRIG ADIKIEKHNQ FKVDESALTG ESVAVNKTDL AFAGTLVTHG RAEGEVIATG
ARTQIGQIAD LVRQGGSAKP PLMQRIERFT LIIAIATLII IALIFGLTLL RGADLSQVFL
LGVALAVSAI PEGLPAAITV ALAIGMKRMS QANVIVRKLV AVESLGSCTY IASDKTGTLT
VNEMTISQIS LLSGERYHVA GTGLTPTGLV HKHGHGVPVS TARDPELHRL ALTGVLANEA
HLSFEAKQSH GDQMHADGDG VDLAFLALGY KLNLEMDKAK QPPQEQLFAY ESENQFSASI
NQIEGRSVIS VKGAVEKLLT MCQLDAQQTQ AVLDETHWLA RHGYRVLALA SGEVSDPHHP
LADLDFLGLV AMSDPLREDA IEAVALCQQA QIKVAMITGD HPVTALALAR QLKLANDQDG
VITGEQLTQV QQQSLAEFDH LIASHRVFAR VQPRQKMEIT ESLIRQGEFV AMTGDGVNDA
PALKHAHVGI AMGLKGTDVA RESADLVLTD DRFSSIVKGI IEGRIVYNNI RKVIYLLIST
GAAELLLFIL SVLFAQPIPL FPLQILWLNL VTNGVQDVAL AFEPGEGHEI DQPPRRPSEP
IFDRLMLERL IVSALWMGIV AFGLFSLVLA IGSSENDARN LTLMLMVLFE NVHALNSRSE
RNSLLRMPVL SNPLLLFGII LAQGIHIGAS YTPGLSQALG ISPIGLGQWL MLLSAASTLL
FIDEYHKRLW RQQHKPKVRQ ATADRQLE
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