Gene Shew_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3212 
Symbol 
ID4921570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3829732 
End bp3830226 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content51% 
IMG OID640164822 
Productcell division protein ZipA 
Protein accessionYP_001095337 
Protein GI127514140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACATA AGGGAAAACT CTTCTTTTTC TGCGGCAAGA TGGGCGCGGG TAAGTCGACC 
AAGGCGAGGC TCATCGCAAA TAAAAACGGG GCGCAGCTAT TGTCAGAAGA TGAATGGTTA
GCGGCCCACT TCCCCAATCA GATTGAGTCG TTTGATGACT ATATTCACTA CTCAAGCCTC
ATCAAGCCCT TCATCAGAAA CCATGTGGCC CGCCTGATAA ACCTAGGCAC TAACGTGGTG
ATGGATTTTC CCGCCAATAC CAGAAAGCAG CAGTGGTTTC TCTCGCTCTG CGGCGAGTTA
GCTTGCGAGC ATCAGCTCAT CTATCTGGAT CTTAGCGATC AGCAGTGCCT GGCTCAAATA
GACAAACGGC GCCAGGAGCA GCCCGAGCGC GCCCGCTTCG ATAACGAAGC CGTGTTCCAT
CAGGTGACGC AATATTTTGA GCCGCCGACT GACGATGAGG ATCTGAATAT TTTGCTGGTC
GCAAAGGAAG ATTAG
 
Protein sequence
MTHKGKLFFF CGKMGAGKST KARLIANKNG AQLLSEDEWL AAHFPNQIES FDDYIHYSSL 
IKPFIRNHVA RLINLGTNVV MDFPANTRKQ QWFLSLCGEL ACEHQLIYLD LSDQQCLAQI
DKRRQEQPER ARFDNEAVFH QVTQYFEPPT DDEDLNILLV AKED