Gene Shew_3155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3155 
Symbol 
ID4921993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3757039 
End bp3757548 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content51% 
IMG OID640164765 
Producthypothetical protein 
Protein accessionYP_001095280 
Protein GI127514083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CCGCGACCGT TATTTTAAGC TATGCATTTA TGTACTTTGT TTTGTTCATC 
ATTTGTCCTC TCGTCATCGT GACCTTCGTC ATGACGTGCA TCAAGTTCTT TAGATCAAGC
GAGAATCAGC TGGTCGATGC CGCCGTAAGC ATCAAGCCTC ACTTGCTCGA CAAGGATTCA
ATGCACTTTT TGAAAGGCTT AAAGGCCATC GCCGCCAACC GCTACGATGT CCTTTACGGA
GCGTCGCTGG TGAATGTAGT CGACTTAGAT GACTCCCTCA GGAACCACGA GGAGGTGCAG
GACTTCATGG AGCACTGTCA CCTGGATTAC GTGGTCGTCG ACAACGAATC TTCTGCGGTC
AAACTCGTGG TGAGCGACCC TGCGGCCAGC TCTCCAGAGC AGATGAAGTT TGTCGAAAAA
TGTTTGGATT ACATAGGGGT GCAGCTGATT AAGCTGGACA AAGACAAGCA TTGCGACGAA
GCCTTGCTGC GCACCGCACT CGCCGCCTGA
 
Protein sequence
MNTTATVILS YAFMYFVLFI ICPLVIVTFV MTCIKFFRSS ENQLVDAAVS IKPHLLDKDS 
MHFLKGLKAI AANRYDVLYG ASLVNVVDLD DSLRNHEEVQ DFMEHCHLDY VVVDNESSAV
KLVVSDPAAS SPEQMKFVEK CLDYIGVQLI KLDKDKHCDE ALLRTALAA