| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3153 |
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| Symbol | |
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| ID | 4921991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3754528 |
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| End bp | 3755532 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164763 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001095278 |
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| Protein GI | 127514081 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA AAGTGAGCCG ACTCGATTAC TATACCCTGC AGGTATTTAT CGGACTGGTT
GAGCTGAAGA GCGGCAGTGC GGTGGCCGAG CGATTGCGTA CCACTCAGTC TAAGGTGAGC
CGCAGCCTGA CCTGCCTGCG GGAGGTGCTG GAGGACGAGC TCTTTATCCG CCAGCAATAT
GGCTTCGAGC CCAATCAGGT CGCCCTCACC ATCTATCCCA TGGTCAAGAC CATAGTGGAA
CAGTACGACA AGATAGTGGC CGCCACCATA GACAAGGGTG CCGAGCCCTA TCAGCTCTGT
GTCGCCACCT ATGAGCAGTG GTCGCTGATG GCGATGAACT GTGTGCACAA CACCTGCCAC
TGTATCGAGG GCGGCGTCAG CATCAATATT CAGCCCTGGA CCGATAAGGT CAATCAGCGT
CTGTGTCAGG GCAAGGTCGA CTGCAGCATC TCCACCGAGC CGATTAATCA CCCCATGGTG
AACAACTTTA AGCTGGGGGA TATCACCCAT TTCTTCATCG TCGCCCGCCG TGACCACCCT
ATCTTAACCA GCGACGATCC CTTAGCGCAG ATGTTTAACT ACCATATCGC CCTAGTGAAC
ACTCACCTGC AGGAGCAGGA GCCCCACCCC ATAGAGCTGT ATGCCAAGGC CAGGCAGATA
GAGATCCGCG TGGCCCTCAA GAGCCCGAGC CTGAGGATGT TGGTGGATCA TGTGAGTCAC
AGCGAGGATA TCGCCCTGCT CTCCTCGGCC ATGTCGATGA GCTATTTCGA GAATCGCGAC
GATGTGGACT ATCTGGATAT CTCCAGGATC TGGCTGCAGA CCCGAGATCT CGAGACCGAG
AGCTACTATC TGCATTGCCA CAAGGGGATC AAACCAGAGC TAGCCAACTG CCTGCGCCGG
GTACTGACGG AGAAGCTGAT CGAGATGCAG GCCCACTGCG ATCAGGTGGC TCAGGAGCGT
ACGCCCCTCG CCCAGCCGAG CATAGCGCCA GAGCCTTCAG CATAA
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| Protein sequence | MLKKVSRLDY YTLQVFIGLV ELKSGSAVAE RLRTTQSKVS RSLTCLREVL EDELFIRQQY
GFEPNQVALT IYPMVKTIVE QYDKIVAATI DKGAEPYQLC VATYEQWSLM AMNCVHNTCH
CIEGGVSINI QPWTDKVNQR LCQGKVDCSI STEPINHPMV NNFKLGDITH FFIVARRDHP
ILTSDDPLAQ MFNYHIALVN THLQEQEPHP IELYAKARQI EIRVALKSPS LRMLVDHVSH
SEDIALLSSA MSMSYFENRD DVDYLDISRI WLQTRDLETE SYYLHCHKGI KPELANCLRR
VLTEKLIEMQ AHCDQVAQER TPLAQPSIAP EPSA
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