| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3152 |
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| Symbol | |
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| ID | 4921990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3749031 |
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| End bp | 3753968 |
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| Gene Length | 4938 bp |
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| Protein Length | 1645 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164762 |
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| Product | peptidase S8/S53 subtilisin kexin sedolisin |
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| Protein accession | YP_001095277 |
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| Protein GI | 127514080 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACCC AACAAATGTT TAAGCGAAGC GCCGTCGCCA GCCTGACCGC GCTCTATCTC
GCCGGGGCGG GCTCGATTGC CATCGCTCAG CCGGGGATGG AGAAGGTGCC TGGCACCAGC
TTCTACACCC CGACCTTTAC CGCCGAAGAT ATTCAGCGGG TCAACGAGGA ACGTCAACTC
GAGTTGAGTG GCGAGGTCTA CCTGGGCACA CCTGGGCAGA TCAACCGCGT CAAGAAGGCG
CGCACGCCTG AGGAGATCTT CACGCCATCG GAAAAAGCCA GCGGGGTGCA GACCTATATC
GTTCAGCTCG ATGCCGAGCC GCTCGCCACC TATGCCGGTG ACGTGCCGGG CTACGCCGCC
ACCACGGCGC CCAAAAACCG CTCAGTGATC GCCAAGGGCC GAGTCGCGGT CAATACCGCC
TCGGCTCAAT CCTACAAGCA ATACCTGGTG TCCAAGCAGG ATAAGTTTAT CGCCAGCGCC
CGTCAGGCCG GCGCCTCGGT GAAGGTGACT AAGCAGTTCA CCCTGGCGAG CAATGCCATG
GTGGTGGAGA TGACCCAGGA AGATGCCATC AAGATGTCTC ATCAGCGTGG CGTCACCCGC
ATCTCGCCTA ACCGCGTGTT CCAGCTGCGC ACCGACCGTG GCCCCGAGTT CATCGGCGCC
GACAAGGTGT GGCAGGGCAC GGCAACCTCG GGCAGCCTGG CCGCCAAGGG TGAGGGTATG
GTCGTGGGTA TCATAGACAC GGGGATCAAC ACAGATCACC CGGCGTTTGC CGACGATGAG
GCCTACGCCA CGACTAACCC CTTCGGCGCC GACAACGGCG TGGGCGATTG TGTCGACTCG
CCAGAGCTGT GTAACAACAA GCTTATCGGT CTGCACTCCT ATCCTGAGAT CACCGATATC
TATGCGGCGC CCGAGTTTCA AACCGGCGGC CGCCCCGTGA TGATCCGCCC GGCCAATGGC
GAAGACTATA ACGGCCACGG CTCTCACACC GCCAGCACGG TCGCGGGTAA TACTCTGACC
GACACCCCGC TGCAAACCTT TAGCGGCGAG GCGACCAGCG ACGGCATCAA TGTGCCCTTT
AACTTCCCAC AAACCAGTGG TGTGGCGCCC CGCGCCCATA TCATCGCCTA TCAGGTCTGT
TGGCCAGGTG GCAGTGGCGA CCCCTATGCG GGTTGTCCCG AGTCGGCGAT CCTGTCTGCA
TTTGAAGATG CGATAGCCGA TGGCGTCGAT GCCATCAACT TCTCTATCGG CGGCGCCGAG
TCTCTGCCTT GGGCCGATCC CATGGAGCTT GCCTTCCTGG CGGCCCGTGA GGCGGGGATC
TCTGTCGCCG TGGCGGCGGG TAACAACGGC GCCTACTGGT CGTCGGATCA CAGCTCGCCT
TGGGTGACTA CCGTAGGTGC CAGCACCCAT GATCGTCAGC TCGACGCCGG GGTGAAGACC
CTAGGTGAGT TCGAAGGGGT AAGCGCGCCA ACCGCGCCTA TGCAGGGTAA GAGCTTCTCC
GGTGGTATTA CGGGCCAGGT GGTGATGGCC GAGAAATATG CCGACCCGGA TCTTAACGAT
GGCTATAACG CCGCCAGCTG TAATGCGCCT TTCCCTGCCG GTACCTTCAC CAGCGATCAG
ATCGTGGTGT GTGAGCGCGG CGACATCGCT CGCGTCGACA AGGCCAAGAA CGTGGCGGCC
GGTGGCGCAG GTGGTTTCAT CCTGCAAAAC ATCAGCTACT CGGCGGACAA CCTGGTGGCG
GACAACTTCG TGCTGCCCGG CATTCAGATC AAGGCCGCCG AGCGCTACAA GCTGCGTAAC
TGGGTAAACC GTAACGGCGA AGCCGCCCGC GCGACCATCT CAGACTATAG CAACGACTAT
TACTTGGACG CTGAGCTGGG CAACAACCTG GCGACCTTCA GCTCCATGGG GCCGAGCCGC
ACCAACAACA CTCTGGTACC GGATCTGACG GCGCCGGGTG TCGACATCTA TGCGGCCAAC
GCCGACGATC AACCCTTCAC CTACTCGCCG ACGGCCTCCG ACTGGACCTT CATGAGCGGC
ACCTCGATGG CGACGCCTCA TGTGACCGGC GCCATGACGC TGCTGAGTCA GATCCATCCA
GACTGGACGC CGGCTGAGAT CCAATCGGCG CTGATGCTAA CGGCGGGCCC AGTGATGCTC
AACACCGGCT ATCAGCTGAT CGAGCCTTAC TACAACTTCA TGGCCGGGGC AGGGGCGATC
AACGTGGCGC GCGCCGCAGA CACCGGCCTG TTGATGGATG AGACTGTCGA AAACTACCGC
AATGCCGACC CGAGCAACGG CGGCCTGGTG AATTGGCTTA ACATCCCCTC TATGGTGGAG
ATGGAGTGCA CCGACACCTG CAGCTGGATG CGTACGGTCA AGGCGACCCG TGACGGTACC
TGGACGGTTG AGGGTATCGG CAAGGAGGAG GGCTTCGAGC TGACGGTATC GCCGGCGCAG
TTCTCCCTCA AGGCGGGTGA GACCCAGAGC ATTATCGTGA CGGCGACACC GCCGAGCAAG
ATAGAGATCA AGGTAGATCC CGAAGAGGCC GACGGCCCGT GGGATGCTGT GCTCAACAAG
GACACCTTCT TCAACGGCCA GGTGGTGTTG AAGGAGCAGG GTGACAGATC GCCAGAGGTG
CACATGCCCG TAGTGGTGGC CACCAGTGGC GAGCAGCTGC CCGTGTCACA TCATTTCGAG
ATCACCAGGG ATCAAGGCAC AGAAACCCTG ACGGTGAATA CCGATGCCTA CAGCCAGCTG
ACGCCGCGCT TCTACGGCCC GGTGAAGCCA GAGGTGTATA GCAATCGTCT GACCGCCGTG
GGGCCTTTCC TGCGTCAGGA TTATATCGAG AAGGGCTGGG ATATCCGCAC CATCACGGTA
CCCGAGGGCG CCAAGCGTCT GGTGGTCGAG GTGCAGAAGG CAGGAGTGGT GAGCACCCTC
GAGGATCTCA ACCCTCGCTA CACCACGCCT CATCCGTTTG TGATTGTGGG TCTGGATGAG
AACGACAACG GCACCTTCGT GCCAGACAGC GAAGCCGACA GCAGCGCCAT CAAGGCGGAA
TACTCGGCGG AAACCGTTTG TCTCTCAACC AGTCAGGCGG AGCATAACTA CTGTAGCCTG
GAAAACCCGG CGCCCGGCAC TTACTGGGTT GCTACCGCCA TGGCCTATGG TCAGGGTGAA
GTGGACGTGG ATACAGGCTA CGCCATCATC ATGGAAGATG ACGATCGCGG TAACCTGAGC
ATCACGGGTC CAGCCTCGCA CGATGGCAAC GGTAACTATG AGATCGGCAT CAACTGGAAC
CTGCCACAGA CCCAGGCCGG TGATATCTAC TATGGTGGTT TCGACCTCGG CAACATGCCG
GGCGCCGAGG GCACCCTGGG CTTCACCGCC CTGGATATCC GCCGCGCCGA CGATGCGGTG
ACCTGGGAAG TGAGCCAGGA CAAGGCACGT AGCATGGATG TGGTGGATAT CAGCCTGAAG
ATCGCCGCCA ACATGGAGAC TCAGGACCGT CAGTACCAGT TTGCCCTGCA ACTGCCTGAG
GGGATGCGTC TGGCACCTGC GACCCTGACC ACCAACAACG ATCAGGTGAC TCAGGCGGTG
ACCGCCGATG AGCGCGGCTT TACCCTGACA GGCATGCAGG CATCCACCCG CGACGTACAG
CGCGAGTACA AGATGACCAC TAACCTGACC GACAAGATGT GTCGCACGCC GATGATCGAC
GAGTACTCGA CCGGTGGCTA TATCGACCTG TTCGGTGAGT TTAAGATGCA GCCGCTGGCC
GACTGGTTTG TGGGCGACTA TCGCAGCGCC TTCGATGTGC CTATCGACTG GTTGTTCTAC
AAGGAAGGCG CCAAGTTCGA GCTGTACAAC CAGCCGAACG CCGGTTATCT GCGCATGCAT
ACCGTAGGAG CTATGCAGCT CAACACGGGT TACTGGTACA TGATGCTGCA CCGTGGTCCA
GGCTTCCTGG TCGAGGCGCT GGCGCCATTC TGGCGTGGCA GCTTCGAAGG TAAGTATCGT
CGTCACTGGG AAGATCCGTG GGGACTGACC ATTGCCTCTC AGTATGCCGA GGAGCGTCCA
GACCTTGGAG ATCTACTCTT CCTCGAGTTC GATAACGTGA CCGATAAGAA CACAGGCGAA
GAGTATGATT TCGAAACGAT TCTGCGTAGC GGCATCGACG ACCGTCCGGG TCAGTTCGAG
ATCATCTATG CCTACGACAA CCTGGGTGCC GATCTGGCCA AGGGTGCCGT GTTCCTCGAA
GGTTTCGATA CTCAGTGGTC GACCAAGGCG GGCGCCAAGG GCGGCGGTCT CTATGAGGTG
CTGGGCTTCG ATAACTTAGA TGAGGTGCTA GCCGACGATC TCGTGGTCTG TTTCGACTAT
GTGGGACCTG AGCAGAGCCG TATGGAGGTC AACTTCAAGG CGGTGATCAA GCCTGAGGCG
ACAGGTACGG TGCAAGACAT AGTGCTGGAT TATGACCTGG AAGGCGCACC GTCGATTCAG
CTCACCCACG CCATCAGCGT CCAAGGCAAC ATACAGATCG CCGAGATTGC CGATCAGGTC
GTGGCCGAGA ACACGCCGCT GGAAGGGCTG ACGGTAAGCT ATATCGATGC CAACAAGGTG
CCGAACACGG TAGAGGTAAC AGGCGAGCAC ATCACGGCCG AGGTGCAGGG CAACAGCTTT
ACCCTGATCC CAGAGGCCAA CTTCCACGGT GACACCCTTG TCACTGTGAC CGTGCGCGAT
AACGAGCACA GTGGCGATGC CGCCAGCACC AGCTTCATGC TGACGGTAGA ATCTGATGGC
GTCGAGCCGA CACCGCCGCC TCAGCCTGAG GTTGTGCAGC CTGAGTCGAG CTCGGGTGGT
GCCTTAGGCT TGGGTCTGCT TGGCCTGCTG CCGCTGGCAC TGCTGCGTCG CCGTAAGGCC
ATGGCGCGTC TGAGCTAA
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| Protein sequence | MRTQQMFKRS AVASLTALYL AGAGSIAIAQ PGMEKVPGTS FYTPTFTAED IQRVNEERQL
ELSGEVYLGT PGQINRVKKA RTPEEIFTPS EKASGVQTYI VQLDAEPLAT YAGDVPGYAA
TTAPKNRSVI AKGRVAVNTA SAQSYKQYLV SKQDKFIASA RQAGASVKVT KQFTLASNAM
VVEMTQEDAI KMSHQRGVTR ISPNRVFQLR TDRGPEFIGA DKVWQGTATS GSLAAKGEGM
VVGIIDTGIN TDHPAFADDE AYATTNPFGA DNGVGDCVDS PELCNNKLIG LHSYPEITDI
YAAPEFQTGG RPVMIRPANG EDYNGHGSHT ASTVAGNTLT DTPLQTFSGE ATSDGINVPF
NFPQTSGVAP RAHIIAYQVC WPGGSGDPYA GCPESAILSA FEDAIADGVD AINFSIGGAE
SLPWADPMEL AFLAAREAGI SVAVAAGNNG AYWSSDHSSP WVTTVGASTH DRQLDAGVKT
LGEFEGVSAP TAPMQGKSFS GGITGQVVMA EKYADPDLND GYNAASCNAP FPAGTFTSDQ
IVVCERGDIA RVDKAKNVAA GGAGGFILQN ISYSADNLVA DNFVLPGIQI KAAERYKLRN
WVNRNGEAAR ATISDYSNDY YLDAELGNNL ATFSSMGPSR TNNTLVPDLT APGVDIYAAN
ADDQPFTYSP TASDWTFMSG TSMATPHVTG AMTLLSQIHP DWTPAEIQSA LMLTAGPVML
NTGYQLIEPY YNFMAGAGAI NVARAADTGL LMDETVENYR NADPSNGGLV NWLNIPSMVE
MECTDTCSWM RTVKATRDGT WTVEGIGKEE GFELTVSPAQ FSLKAGETQS IIVTATPPSK
IEIKVDPEEA DGPWDAVLNK DTFFNGQVVL KEQGDRSPEV HMPVVVATSG EQLPVSHHFE
ITRDQGTETL TVNTDAYSQL TPRFYGPVKP EVYSNRLTAV GPFLRQDYIE KGWDIRTITV
PEGAKRLVVE VQKAGVVSTL EDLNPRYTTP HPFVIVGLDE NDNGTFVPDS EADSSAIKAE
YSAETVCLST SQAEHNYCSL ENPAPGTYWV ATAMAYGQGE VDVDTGYAII MEDDDRGNLS
ITGPASHDGN GNYEIGINWN LPQTQAGDIY YGGFDLGNMP GAEGTLGFTA LDIRRADDAV
TWEVSQDKAR SMDVVDISLK IAANMETQDR QYQFALQLPE GMRLAPATLT TNNDQVTQAV
TADERGFTLT GMQASTRDVQ REYKMTTNLT DKMCRTPMID EYSTGGYIDL FGEFKMQPLA
DWFVGDYRSA FDVPIDWLFY KEGAKFELYN QPNAGYLRMH TVGAMQLNTG YWYMMLHRGP
GFLVEALAPF WRGSFEGKYR RHWEDPWGLT IASQYAEERP DLGDLLFLEF DNVTDKNTGE
EYDFETILRS GIDDRPGQFE IIYAYDNLGA DLAKGAVFLE GFDTQWSTKA GAKGGGLYEV
LGFDNLDEVL ADDLVVCFDY VGPEQSRMEV NFKAVIKPEA TGTVQDIVLD YDLEGAPSIQ
LTHAISVQGN IQIAEIADQV VAENTPLEGL TVSYIDANKV PNTVEVTGEH ITAEVQGNSF
TLIPEANFHG DTLVTVTVRD NEHSGDAAST SFMLTVESDG VEPTPPPQPE VVQPESSSGG
ALGLGLLGLL PLALLRRRKA MARLS
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