| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3099 |
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| Symbol | |
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| ID | 4922263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3680473 |
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| End bp | 3681051 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164709 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001095224 |
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| Protein GI | 127514027 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.806996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCAACG CCGAATTTGA TCGCCAGCAG GTACTGAGAC AGGCCATGAA TGCCTTTATC
GACAAGGGCT ACGCCAAGAC CAGCATGCAA GATCTCACCA AGGCCACTGG GTTACACCCT
GGCTCCATCT ACTGCGCCTT CGACAACAAG CGCGGCCTCC TGCTGGCGGT GATAGAACAA
TATGGGCAGG ACAGAAAAGC CGAGCTAACG GCCTGTTTCG GCTCGGCGCT CCCCTTCCCC
GAGCAGCTTA AGCAGTATCT GGCCGGCATA GTCGATGAGT GTCAGTGCAA GGATACGCCC
AAGGCCTGCC TGCTGACCAA GGCGCTCAAC GAGGTGGCCG AGCAAGATGA GATGATAAGA
GATGCTGTGC AATCGCATCT AGAGAGTTGG CAGCAGGCGC TGACGACCCA GTTTGAACAA
GCCGTCGACA GGGGAGAACT TAAGGGAGAT GCCGCTCATC TGGCGCGCTA TTTCGTTATG
GGGATCTTTG GGCTCAGAAC CTTTGCCCAT ACCAAGCCGG CGCCAGAGGT ATTGCACGCC
CTGGCGGACC AGCTCTATCG CGACACCTGC CGCGGCTAG
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| Protein sequence | MRNAEFDRQQ VLRQAMNAFI DKGYAKTSMQ DLTKATGLHP GSIYCAFDNK RGLLLAVIEQ
YGQDRKAELT ACFGSALPFP EQLKQYLAGI VDECQCKDTP KACLLTKALN EVAEQDEMIR
DAVQSHLESW QQALTTQFEQ AVDRGELKGD AAHLARYFVM GIFGLRTFAH TKPAPEVLHA
LADQLYRDTC RG
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