Gene Shew_2946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2946 
Symbol 
ID4924083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3491095 
End bp3491550 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content48% 
IMG OID640164555 
Producthypothetical protein 
Protein accessionYP_001095071 
Protein GI127513874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0125573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0151301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTA TGATGACCGG AAAATTTTAT CTCAGCGCAC TGTTAAGCCT ATTCCTTTGC 
GCCCCAACAT TTGCAACGAC CATCTATAAG TGGGTAGATG AAAACGGTGT CACCCACTAT
AGTCAGGAAA AGCCCCCCGA GGCAAAGACA GAAAAGCTCT ATAGCGAAGA TATCGAACAG
AAAAAAGTTG GCTTCACCGC CCCTAAGGTC GTCGAAAAAA AGGGTGAGCA GAAGAGCGAG
GCCGCATTAG CCGCCGAAGC GATCAACGAG AAAGATAAGG CTCAGGCCAA GGCCATCTGC
GAAAATGCCA AGCATCAGTT AAATGTGCTC GAGACCCATA CTCGCCTGAC ACGTAAAAAT
GAAGAAAATG GCGAAATGGT GCGTATGACT GAGGAAGACA GGCAGTCAGA GATCTCCGCG
CAGAAACAGC GCATCAAGCT CTTCTGCGAA AAGTAG
 
Protein sequence
METMMTGKFY LSALLSLFLC APTFATTIYK WVDENGVTHY SQEKPPEAKT EKLYSEDIEQ 
KKVGFTAPKV VEKKGEQKSE AALAAEAINE KDKAQAKAIC ENAKHQLNVL ETHTRLTRKN
EENGEMVRMT EEDRQSEISA QKQRIKLFCE K