Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2946 |
Symbol | |
ID | 4924083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3491095 |
End bp | 3491550 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640164555 |
Product | hypothetical protein |
Protein accession | YP_001095071 |
Protein GI | 127513874 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0125573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0151301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACTA TGATGACCGG AAAATTTTAT CTCAGCGCAC TGTTAAGCCT ATTCCTTTGC GCCCCAACAT TTGCAACGAC CATCTATAAG TGGGTAGATG AAAACGGTGT CACCCACTAT AGTCAGGAAA AGCCCCCCGA GGCAAAGACA GAAAAGCTCT ATAGCGAAGA TATCGAACAG AAAAAAGTTG GCTTCACCGC CCCTAAGGTC GTCGAAAAAA AGGGTGAGCA GAAGAGCGAG GCCGCATTAG CCGCCGAAGC GATCAACGAG AAAGATAAGG CTCAGGCCAA GGCCATCTGC GAAAATGCCA AGCATCAGTT AAATGTGCTC GAGACCCATA CTCGCCTGAC ACGTAAAAAT GAAGAAAATG GCGAAATGGT GCGTATGACT GAGGAAGACA GGCAGTCAGA GATCTCCGCG CAGAAACAGC GCATCAAGCT CTTCTGCGAA AAGTAG
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Protein sequence | METMMTGKFY LSALLSLFLC APTFATTIYK WVDENGVTHY SQEKPPEAKT EKLYSEDIEQ KKVGFTAPKV VEKKGEQKSE AALAAEAINE KDKAQAKAIC ENAKHQLNVL ETHTRLTRKN EENGEMVRMT EEDRQSEISA QKQRIKLFCE K
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