| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2930 |
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| Symbol | |
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| ID | 4922132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3470587 |
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| End bp | 3471081 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164535 |
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| Product | rare lipoprotein B |
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| Protein accession | YP_001095055 |
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| Protein GI | 127513858 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2980] Rare lipoprotein B |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.692064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00636409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTTATTA AACGCTTATG TTTTGCAATC TTAGCCCTCT CGGTGCTGCT TAGCGCCGGA
TGTGGTTTTA AACTTCAGCG CAGCTACTCG ATCCCAGATT CTCTTAAGAC GCTCACCCTG
AGCAGCCAGG ACGAATATAG CGAGCTGACC CGCCTGGTGC GCGAACGCCT GCGTCTCAAC
AGCATCACAG TGGTGGAAGA TGACGCCAGC GTGCCTGTCG TTAGGATCCT CAACGACTCG
CTGGACAGAA GCACTCTCTC CCTCTACCCC ACGGGAAATG TGGCGGAATA TGAGCTCAAC
TATCATGTGC GCTTCGCGGT GCAGTATCCC GAGCGTGAGG CCAAGGCCTT CGATGTCGAC
ATTCACCGCG ACTACCTGGA CGATCCCCGC ACCGCACTGG CAAAGAGCCG TGAGATGGAG
CTACTCGTAA AAGAGATGCG CATCCAGGCC GCCGACCAGA TCATCCAGAT CCTGGCCTCT
ATCGAGACCA ACTGA
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| Protein sequence | MLIKRLCFAI LALSVLLSAG CGFKLQRSYS IPDSLKTLTL SSQDEYSELT RLVRERLRLN
SITVVEDDAS VPVVRILNDS LDRSTLSLYP TGNVAEYELN YHVRFAVQYP EREAKAFDVD
IHRDYLDDPR TALAKSREME LLVKEMRIQA ADQIIQILAS IETN
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