| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2890 |
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| Symbol | |
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| ID | 4921819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3429052 |
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| End bp | 3429636 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164487 |
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| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
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| Protein accession | YP_001095015 |
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| Protein GI | 127513818 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.893732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATCT GGCTTGGCGC CCTACTATTA CTCGCTTTTT CCGGCCTGGC GCAGGCACTG
GACATTCAGA GCGACACCAT CTATCCCAAG GTCAAACTGG AAACCACCAT GGGTAATATA
GTGGTCGAGC TGGATCGTAA GCGTGCCCCC ATCACGGTAG ATAACTTTCT CACCTATGTG
GTCAAGGGCC ACTACGACAA CACCCTGTTT CACCGCATCA TCCCTGGCTT CGTGGTGCAG
GGCGGCGGCC TCAATCCCAA GCTGGAAGAG AAGCCCTATG GCAAGCCTAT CGTTAACGAG
TCGGGCAATG GCCTGAGCAA CGGCCTGGGC ACCATCGCCA TGGCCCGCGA AGACGATCCA
CACTCTGCCA CTGCGCAATT TTACTTTAAC GTAGGTGACA ACAAGCGTCT TGACCCCTCT
AAGCGTCGCT GGGGTTACGC CGTCTTCGGT GAAGTCACCG AGGGGATGGA AGTACTGGAA
GCCATGGCCG AAGTAGAGAC GCAGATCAAT ACCAAGCTGG GCTGGCCCGA CTTCCCGGTG
CAGCCGATCA TCCTCAAGAA GGCGACCCTG CTACCTAGGC AATAG
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| Protein sequence | MRIWLGALLL LAFSGLAQAL DIQSDTIYPK VKLETTMGNI VVELDRKRAP ITVDNFLTYV
VKGHYDNTLF HRIIPGFVVQ GGGLNPKLEE KPYGKPIVNE SGNGLSNGLG TIAMAREDDP
HSATAQFYFN VGDNKRLDPS KRRWGYAVFG EVTEGMEVLE AMAEVETQIN TKLGWPDFPV
QPIILKKATL LPRQ
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