| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2786 |
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| Symbol | |
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| ID | 4922720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3295949 |
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| End bp | 3296461 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640164381 |
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| Product | sterol-binding domain-containing protein |
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| Protein accession | YP_001094911 |
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| Protein GI | 127513714 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3154] Putative lipid carrier protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGAA GTGTGTTGGC AAACATGGCC AAACATCTAT TGCAATATGG GCCTAAAGTC
ATAGCTAAAC CATTAAACTT AGTGCCTTTT TCAATTAAGG CTCAGCTTAT CGAGCGTATT
TTAAATCTGC TGATGGCGGC GCAGATCAAA GATGGCGAGC TGGATTTTTT GCAGGCTCGC
TGGGTGAAGA TTAGCGTGAC CGATCTCGAG TTAAGCTTCG AGGTTAGCTT CGATGAGCGC
CTCATCGTCC GTGAAGGCGG CGAGGCCGAG GTGAGCTTTA GCGGCTGTAG TCAGGCGCTG
CTTCTGATCG CCGCCGGTAA GGAAGACCCA GATACCCTGT TTTTCCAGCG TCGTCTGGCG
ATTGAGGGAG ATACAGAGTT GGGGCTAGAG GTAAAAAATC TGCTGCTCAG CATAGAGTTT
GACACCATGC CGGTATTTAT GCGCCAGAGC ATCACTCAGG CCGCCGCCAT GCTGACCCAA
CTGCAGCGCC AAGCGAACAT GCCTTGGGCC TAA
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| Protein sequence | MQRSVLANMA KHLLQYGPKV IAKPLNLVPF SIKAQLIERI LNLLMAAQIK DGELDFLQAR
WVKISVTDLE LSFEVSFDER LIVREGGEAE VSFSGCSQAL LLIAAGKEDP DTLFFQRRLA
IEGDTELGLE VKNLLLSIEF DTMPVFMRQS ITQAAAMLTQ LQRQANMPWA
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