| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2751 |
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| Symbol | rdgC |
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| ID | 4922918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3252174 |
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| End bp | 3253085 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640164346 |
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| Product | recombination associated protein |
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| Protein accession | YP_001094876 |
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| Protein GI | 127513679 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2974] DNA recombination-dependent growth factor C |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000058571 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000457301 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTGGTTTA AGAATCTTAC CGTATATCGT TTTAATAAAC CTTTCTCTGT CGATACCGAA
GCGCTAGAGA AGTCACTGGA AGACTTTACC TTTTCTCCCT GCTCCAGCCA GGACATCAGC
AAGTTCGGCT TCTCCAAAGC ACTGGGTAAA CTCGGCCACA CCTTAGTACA CAGCGCCGAG
AACAGACACC TTATTTGTGC CACCAAAGAG GAGAAGATCC TGCCTTCTCA GGTGGTAAAA
GAAGCCCTGG AAGAAAAAGT GGCGCAGATC GAAGCCGAAG AAAACCGCAA GCTGGCCAAG
AAAGAGAAAG ATGCGCTCAA AGAGGAGATC ACCACCACGC TATTGCCACG CGCTTTCTCT
CGTCGCAGCC AGATCCACGC GTTGATATTA CCTGAGATTG AGATGATCCT GGTGGACTCA
TCAAGCGCCA CCAAGGCAGA AGAGCTACTG GCGCTGCTGC GTAAGGCGCT GGGCTCGCTG
CCAGTGATCC CTATGAGCTT CAAGACGCCA ATCGAAGCCC AGCTGACCGA GTGGCTCAAG
AGCAACAGCG CGCCTGCTCC GTTTGAGATG CAGGATGAGG CCGAGCTTAA GTCAGATTCA
GATGAAGGCG GCATAGTACG CTTTAAACAG CAAGACCTGA CCGAAAACGA GGTGCTGGCG
CATCTTGAGG TGGGTAAGCA GGTGCATAAG CTGGCGCTGC ATTTCGGCCA GTCTATCGCC
TTCGTGCTGC AATCCGATGC TGGCATCAAA CGCCTGAAGT TCTCGGAAGA GTTTAGGGCG
CACAACGATG AGGTGAGCAC AGAAGATCCA CTGGCGCGTC TGGACGCCGA CTTTGCCCTG
ATGGGCAGCG AGCTGATCGC CCTGATGAAC TCGCTGGTCG AAGTATTGGG CGGCCTGGAA
GATAGCCTGT AA
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| Protein sequence | MWFKNLTVYR FNKPFSVDTE ALEKSLEDFT FSPCSSQDIS KFGFSKALGK LGHTLVHSAE
NRHLICATKE EKILPSQVVK EALEEKVAQI EAEENRKLAK KEKDALKEEI TTTLLPRAFS
RRSQIHALIL PEIEMILVDS SSATKAEELL ALLRKALGSL PVIPMSFKTP IEAQLTEWLK
SNSAPAPFEM QDEAELKSDS DEGGIVRFKQ QDLTENEVLA HLEVGKQVHK LALHFGQSIA
FVLQSDAGIK RLKFSEEFRA HNDEVSTEDP LARLDADFAL MGSELIALMN SLVEVLGGLE
DSL
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