| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2738 |
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| Symbol | |
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| ID | 4922934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3234978 |
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| End bp | 3235421 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640164333 |
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| Product | alkylhydroperoxidase |
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| Protein accession | YP_001094863 |
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| Protein GI | 127513666 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0546441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000621665 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGTACAA GTATCGATTA CATGACACTA GCGCCAGAGG CCCTGGGCAT CTTATACAGC
CAAGAAAACT ATCTAAAGCA GGTATTTAGT GACCATGAGA AGTTGGGGCT GGCGGAGCTT
GAGCTGTTGA AACTGCATAT CTCTCAGGTG AATGGCTGCG CCTTCTGTAT TGAGATGCAC
ACTAAGCTCG CCTTGGAGCT GGGCGTTAGC CTGGATAAGA TAGTCGGTCT CAGTGCCTGG
CGTGGTCTAC CCTATTACAG CGAGGCGGAG CGTGAGGCGC TCGCCTGGGC CGAGCAGCTG
GCATTGCCGC ACATTTCTAT CGAGGCCCGT GAACAAGCGC GGCGCTATTT TGGCGACAAG
CTGTTGGTCG ATTTGACCTT GGGGATCAAC GCGATCAATA GTTGGAATCG TCTCTGTAAG
GCGCTCAAGC CTAGCCTTAT CTAG
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| Protein sequence | MSTSIDYMTL APEALGILYS QENYLKQVFS DHEKLGLAEL ELLKLHISQV NGCAFCIEMH
TKLALELGVS LDKIVGLSAW RGLPYYSEAE REALAWAEQL ALPHISIEAR EQARRYFGDK
LLVDLTLGIN AINSWNRLCK ALKPSLI
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