| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2706 |
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| Symbol | |
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| ID | 4922991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3202453 |
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| End bp | 3203076 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164301 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_001094831 |
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| Protein GI | 127513634 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000472641 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAAGA GTATGACGGC GACCCGGGAC ATTCTAACCG GCCCGATTTT CGCCAATAAC
CCCGTGGCCA TGCAGGTGCT TGGGGTCTGT TCGGCGCTGG CGGTGAGCAA CTCGATGCAG
ACCGCATTGG TGATGACCCT GGCGGTGACC TTCGTGTTGG TCTTCTCCAA CCTGATCATC
TCCAGCATCC GTAACTTTAT TCCTAACAGC GTGCGCATCA TCGCTCAGAT GACGGTGATC
GCCTCCCTGG TGATCATCGT CGACATGGTG CTGCAGGATG TGGCCTATGA GCTGTCGCGT
CAGCTGTCGG TATTCGTGGG ATTGATCATC ACCAACTGTA TCATCATGGG CCGCGCCGAA
GCCTTCGCCA TGAAGATGCC GCCGCATCTG GCGGTGGTGG ATGCCATGGG CAACGCCATG
GGCTATGGCG TTATCCTGCT CAGCGTCGCC TTCGTGCGTG AGCTGCTGGG CGCCGGTACC
CTGTTTGGCC ATGAGATCTT AAAGACGGTC GAGAACGACG GCTGGTACCT GGCCAACGAG
ATGTTCAAGT TGCCGCCGAG TGCATTCTTC CTGATTGGCT TACTGATCTG GGCCATCAAT
GTTATCCAGC GTAAGCGAGG TTAA
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| Protein sequence | MSKSMTATRD ILTGPIFANN PVAMQVLGVC SALAVSNSMQ TALVMTLAVT FVLVFSNLII
SSIRNFIPNS VRIIAQMTVI ASLVIIVDMV LQDVAYELSR QLSVFVGLII TNCIIMGRAE
AFAMKMPPHL AVVDAMGNAM GYGVILLSVA FVRELLGAGT LFGHEILKTV ENDGWYLANE
MFKLPPSAFF LIGLLIWAIN VIQRKRG
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