| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2667 |
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| Symbol | |
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| ID | 4923120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3150223 |
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| End bp | 3156009 |
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| Gene Length | 5787 bp |
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| Protein Length | 1928 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164262 |
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| Product | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ |
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| Protein accession | YP_001094792 |
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| Protein GI | 127513595 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.448913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCAA ATGAAGCGCC TTCTGCCAAA CAAGTGCCCC CAAAGACCCG AGGTCATGGC
AAGATTGCCA TCGTGGGTCT GGCAAACCTC TACCCAGACG CCAAGACCCC TAAGCAGTTT
TGGCAAAACC TGCTCGACAA ACGCGACTCT CGCACCCAAC TCAGCGATGA CAAGCTCGGC
GCCCACTTAG CCGACTTTCG TGGCGAGCAG GGCGAGGCCG ATCGCTTCTA CTGCGACAAG
GGCGGGTATA TTGAAGATTT TCACTTTAAT CCCTATGGCT ATAAGCTGCC GCCCGAACAA
CTCCAAGGGA TGGACGATAG CCTGCTGTGG GCGCTGGACA CCAGTCGCAA TGCCCTGCTC
GATGCGGGCA TTGCCCTGGA CTCTCCTCAG CTATCACGCT GCGGCATCAT CATGGGCACC
CTCTCTTTCC CTACGGCAAA ATCGAATGAG CTGTTTCTAC CCCTCTACCA TAAGGCGGTA
GAAAAAGCCC TTAAGCAGAA GCTGGCCTGC CCAGACTTCA GCCTGAGCGA CTATAACGCC
CATAGTCCGG CTGCCACCAC CTTAGACGTT GCCAATGGTG CCATCGCCCA CAACGCCTCT
AAGCTAGTGG CCGATGCCCT CGGCCTTGGG CGCGTTCAAC TTAGTCTGGA TGCCGCCTGC
GCCAGCTCTG TCTATTCGCT GAAGCTGGCC TGCGACTATC TCAACACGGG CAAGGCCGAT
CTCATGTTGG CGGGCGCCGT CTCCGGCGCC GACCCTTTCT TTATCAACAT GGGCTTCTCC
ATCTTCCATG CCTATCCAGA ACATGGCTTC TCGGCCCCCT TCGATCGCAA TACCAAGGGG
CTGTTTGCCG GAGAAGGCGC CGGGGTACTG GCACTCAAAC GCCTCGAAGA CGCCGAACGT
GATAATGATA AGATCTACGC CATCGTCAGC GGCATCGGCC TGTCTAACGA CGGCAAGGGC
CAGTTTGTGC TCAGCCCCAA CAGTAAGGGG CAGGTCAAGG CCTTCGAGCG TGCCTATCGC
CACAGCGGCG TAGCGCCGAA GCAGATAGAA GTGATCGAAT GCCATGCCAC GGGCACCCCG
CTGGGTGACA AGGTAGAACT GGCCTCTATG GAGCAATTTT TTGCCCCTGG GCTCGAAGGT
GCGAGCGCGC CCATGATAGG CTCGGCCAAA TCCAACTTAG GGCATTTACT TACCGCTGCG
GGCATGCCGG GGATCATGAA GATGATCTTT GCCATGAATC AGGGCCAGCT GCCCCCAAGC
ATCAACCTCA GTGAGGCCAT CGAGTCACCA AACGGCCTAT TTGGCGCTCA TACCCTGCCC
CGTCAAGTGA CGCCTTGGCC GATTAAGGCC GATAACGCGG CGCGATTAGC CGGGGTATCG
GTATTTGGCT TCGGCGGCTG TAATGCCCAT CTTTTGTTAG AATCCTATAC ACCCACAGAG
TGCGAGCCTT CAACCACAGC GACATCGCCA CAGTTAACTG CACCTTGTCA CAACGGCTCG
ACACCGCAAT TTGTGATCAG TGGCATTGCG GCGCATCTCG GCCCACTTGG CAGCATTAAC
GCCCTCGACA CCTGTATTCG CCAAGAGCAA GAGGCCTTTG TGCCCCTTCC ACCAGCGCGC
TGGAAAGGGT TAGATCAGCA CCCAGAACTG CTAGCGCAAT TTGGCCTGGA CTCGGCACCC
CGAGGCGCCT ATGTGGATAG CTTCGAGCTG GATTTTCTGC GCTTTAAACT GCCCCCCAAT
GAAGACGACC GCCTTATCGG CCAACAGCTG ATGCTGATGA AAGTCGCCGA CGAAGCCATA
CGCGACGCAG CGTTACAGCC AGGGCAAAAA GTGGCCGTCT TGGTCGCCAT GGAGACAGAG
CTGGAACTGC ACCAGTTCCG CGGCCGGGTA AACCTGCACA CTCAGCTCAA ACAGAGTCTG
GATGCCATGG GCGCCAGCCT GAGCGACAGC CAATATCGCG AGCTTGAGGC CCTGGCCATG
GACAGCGTGC TCGACGCCGC CAAGCTAAAC CAATACACCA GCTTTATCGG CAACATCATG
GCCTCGCGTA TCGCCTCCTT GTGGGACTTC AGCGGTCCGG CCTTTACCAT CTCCGCTGGC
GAGCAATCTG TGGGCCGCGC CCTGGATGTG GCGGAAAATA TCATGGTGCA GGAGCAGCTT
GATGCCGTAG TGATCGCCGC GGTCGATCTC TGCGGCAGCC TGGAGCAGGT GATGCTGAAA
AATGCCATCG CCCCCGTGGC CAATCAGAGC CATCCAAACG GCTGGCGACT GGCGGAAGGC
GCCGGCGCCC TGGTGCTGGA AACCTCATCC CACCAAAGCC AGCGTGGCGC TAGCGCCTAT
GGCAAGATAG AGAGCCTCAA CTTTGGTCCT CAGCACCAAT TAGCGCGCCT GTGCGATGAG
CTATTGACCC TCAATGGCAC AGATGCCGAG CAGATCTCAC TGGTCGAGAT GAATGTGGCG
CCTTGCAGCC AGCATCAGCC CCAACAGCTG ATAGCGCAGC TGCCTACGGC GCAGGCTCGT
CTGGTGCAGA GCGACCAACA ACTGGGCCAC AGCTTTGCCG CCGCCGGCAT GACCAGCCTG
ATCGCCACAC TGCTGCGCAT GACACAAGAA AACGCGGACA ACGCCCTGGT CGCCAACTTC
AGCGAAGATC AGAGCGCCTT GCTGCATCTT ACTCAAACCC ATACCCAGCG CGGTGCGCTG
ACCCAAAGGC TAGACCAAGA TCTCACCACC CATGAGGGGC GTAGCCTGAT CAAGCGGGTC
ACCCTGGGTG GACGCGGCAT CATAGAACAC ATACTGACTC AGCCGCTGAC GCAACTGTCA
GCGCTGCAAG ACAAGTTGGC CGCGGCCAAT GGACAAGGTC AGACTAAACC GAAAAAAGTG
TCCAAGCTTA TAAGCTATTT AGGCCAGGTT AATTCGAACA CGACTCAAGC ATCACAGTTT
GCCACGCCGT CGATGACAGG CGGTGCAACA GGTAACTTAC CCACTATGAC CCAGCATTCA
GCTCAGCCAC CAGGCTCACC GATCAGCAAC CCTGATCTCA GCGCCTTTCA TGACAATCAA
CAAAAGGCGC GTCAGGCCCA TCTCGCTTTC CTCAAGAGCC GTGAATCAGG CCTGAAAGTG
GCCGACCTGC TGCTTAAGCA GCAACTGGCC CAAGCCATAG GTAGCCCATC GACGCCAGCT
TCGGCCTCAA GCGTCACCCA GATGCCACTC AAACCAAGGC ACGATCTGGT CGCGCCATAC
CGCGCACCGG TTCCGGCCCA TAAGCCCTGC ATCTGGGACT ACCACGACCT GGTGGAATAC
GCCGAGGGGG ATATAGCCAA GGTGTTCGGC CCCGACTATA GCGTGATCGA CGGCTACTCA
CGCCGGGTGC GCCTGCCCAC CACAGATTAT CTGCTGGTAT CACGGGTCAC CAAGCTGGAT
GCCAAACTGG GCGAATATAA GCCCAGCACC ATGACCACGG AATACGACAT CCCCGTGGAT
GCCCCCTACC TGGTGGACGG TCAGATCCCC TGGGCGGTCG CAGTGGAATC GGGCCAGTGC
GACCTCATGC TAATTAGTTA CCTGGGCATA GACTTCGAGA ACAAGGGCGA GCGTGTCTAT
CGCCTGCTTG ACTGTACCCT CACCTTCTTA GGGGATCTCC CCCGCGGTGG CGATACCCTA
AGGTATGAGA TTAAGATCAA CAACTTCGCC CGCAATGGCG ATACCCTGCT GTTCTTCTTC
TCCTACGAAT GTTTCGTTGG CGATACCATG ATCCTCAAGA TGGATGGCGG CTGCGCAGGC
TTCTTCACCG ACGCCGAGCT GGCTGACGGT AAAGGGGTGA TCCGCACCGA GGAAGAGCTG
CTCGCCCGCA GCCGCGCCAC CAAGCAGATC TTTAACCCAC TCCTGGATTG CCCGCGCACC
CAGTTCAGCT ATGGTGACAT CCACAAGCTG CTGTCGGCCG ATATCCAAGG CTGTTTCGGC
CCATCCCACG CAGGACCTGC TCAGCCTTCA CTCTGCTTCG CCTCGGAGAA GTTCTTGATG
ATCGAAGAGG TCAGCAAGGT CGAGCGCAGC GGCGGCGCCT GGGGGCTTGG ACTGGTCGAG
GGCCACAAGC AACTGGAGCC TAACCACTGG TATTTCCCTT GCCACTTCAA GGACGATCAG
GTGATGGCCG GCTCACTGAT GGCCGAGGGT TGTGGTCAGT TACTGCAGTT CTACATGCTG
CACCTTGGCA TGCATACCCA GACCCAAAAT GGTCGTTTCC AGCCTCTGGA GAATGCCTCG
CAGAAGGTGC GTTGTCGCGG CCAGGTGATC CCGCAATCGG CCCGCCTCAC CTACCGCATG
GAGGTGACAG AGATAGGCTT CAGCCCTCGC CCTTACGCCA AGGCGAATAT CGATATCTTG
CTCAATGGCA AGGTGGTGGT CGACTTCCAA AATCTGGGGG TGATGATCAA AGAGGAAGCT
GAATGTACCC GCTACCCTGA ACTGGAAAGC AGCGACGCAA GCAGTGCACA GGCTAAGGCC
AATCAGGGAG CCTCAGCCAA TGCCCCGCTG ATGACTAATG CACCGCTAAT GGCTCAGGTC
CCCGATCTCA GCGCTGCGCC TAACAAGGGG GTAATTCCGC TGACGCATGT GGAGGCGCCT
GTGACCCCGG ACTACCCTAA CCGGGTACCC GACACTGTGC CTTTTACGCC CTATCACCTG
TTCGAATTCG CCACCGGCGA TATCGAGAAG TGCTTCGGCC CTGAGTTCGC CATCTACCGC
GGCATGATCC CACCGCGTAC GCCATGCGGC GATCTGCAGC TCACCACCCG GGTGATAGAG
GTTAACGGCC AGCGCGGCGA CTTCAAGCGC CCTGCCAGCT GCATCGCCGA ATATGAGGTG
CCACGCGATG CCTGGTATTT CGATGCCAAC AGTCATCAGG CGCTGATGCC CTACTCTGTG
ATGATGGAGA TCGCCCTGCA GCCAAACGGC TTCATCTCGG GCTACATGGG TACCACTCTC
GGCTTCCCCG GCCTGGAGCT CTTCTTCCGT AACCTAGATG GCAGCGGCGA GCTGCTGCGT
CAGGTGGATC TGCGCGGCAA GACTATCGTT AACGACTCAC GCCTGCTCTC TACCGTGATG
GCGGGCACCA ACATCATTCA GAGCTTTAGC TTCGAGCTGA GCACAGATGG CGAGCCCTTC
TATCGCGGCA CAGCGGTATT CGGTTACTTC AAGGCCGAGG CACTTAAAGA TCAGTTGGGG
CTGGACAACG GCAAGACCAC TCAGCCCTGG CATCAGGCCA AGGGTATTAC ACCGGATATT
CGGGTCGATC TGCTGGACAA GGGCGGCCGC CACTTCAACG CGCCAGCGGG CCAGCCTCAC
TATCGTCTGG CGGGCGGTCA GCTGAACTTT ATCGACAGCG TCGAGATCGT CGATAACGGC
GGCACCCACG GCCTGGGCTA CCTCTACGCC GAGCGCACCA TAGATCCGAG CGACTGGTTC
TTCCAGTTCC ACTTCCATCA GGATCCTGTG ATGCCGGGTT CATTAGGCGT TGAAGCCATC
ATAGAAACCA TGCAGACTTA TGCCATCAGC AAAGACTTGG GCGCCGGGTT CACCAATCCG
AAATTTGGCC AGATCCTCTC CAACATCAAG TGGAAGTATC GCGGTCAGAT CAACCCACTC
AACAAGCAGA TGTCGATGGA TGTGAGCATC ACCTCGGTCA AAGAGGACGC AGGCAAGCTG
GTGATCACCG GCAATGCCAG CCTGAGTAAG GATGGCCTGC GGATCTACGA GGTGAGCGAC
ATCGCCATCT GCATCGAAGA AGCCTAA
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| Protein sequence | MPSNEAPSAK QVPPKTRGHG KIAIVGLANL YPDAKTPKQF WQNLLDKRDS RTQLSDDKLG
AHLADFRGEQ GEADRFYCDK GGYIEDFHFN PYGYKLPPEQ LQGMDDSLLW ALDTSRNALL
DAGIALDSPQ LSRCGIIMGT LSFPTAKSNE LFLPLYHKAV EKALKQKLAC PDFSLSDYNA
HSPAATTLDV ANGAIAHNAS KLVADALGLG RVQLSLDAAC ASSVYSLKLA CDYLNTGKAD
LMLAGAVSGA DPFFINMGFS IFHAYPEHGF SAPFDRNTKG LFAGEGAGVL ALKRLEDAER
DNDKIYAIVS GIGLSNDGKG QFVLSPNSKG QVKAFERAYR HSGVAPKQIE VIECHATGTP
LGDKVELASM EQFFAPGLEG ASAPMIGSAK SNLGHLLTAA GMPGIMKMIF AMNQGQLPPS
INLSEAIESP NGLFGAHTLP RQVTPWPIKA DNAARLAGVS VFGFGGCNAH LLLESYTPTE
CEPSTTATSP QLTAPCHNGS TPQFVISGIA AHLGPLGSIN ALDTCIRQEQ EAFVPLPPAR
WKGLDQHPEL LAQFGLDSAP RGAYVDSFEL DFLRFKLPPN EDDRLIGQQL MLMKVADEAI
RDAALQPGQK VAVLVAMETE LELHQFRGRV NLHTQLKQSL DAMGASLSDS QYRELEALAM
DSVLDAAKLN QYTSFIGNIM ASRIASLWDF SGPAFTISAG EQSVGRALDV AENIMVQEQL
DAVVIAAVDL CGSLEQVMLK NAIAPVANQS HPNGWRLAEG AGALVLETSS HQSQRGASAY
GKIESLNFGP QHQLARLCDE LLTLNGTDAE QISLVEMNVA PCSQHQPQQL IAQLPTAQAR
LVQSDQQLGH SFAAAGMTSL IATLLRMTQE NADNALVANF SEDQSALLHL TQTHTQRGAL
TQRLDQDLTT HEGRSLIKRV TLGGRGIIEH ILTQPLTQLS ALQDKLAAAN GQGQTKPKKV
SKLISYLGQV NSNTTQASQF ATPSMTGGAT GNLPTMTQHS AQPPGSPISN PDLSAFHDNQ
QKARQAHLAF LKSRESGLKV ADLLLKQQLA QAIGSPSTPA SASSVTQMPL KPRHDLVAPY
RAPVPAHKPC IWDYHDLVEY AEGDIAKVFG PDYSVIDGYS RRVRLPTTDY LLVSRVTKLD
AKLGEYKPST MTTEYDIPVD APYLVDGQIP WAVAVESGQC DLMLISYLGI DFENKGERVY
RLLDCTLTFL GDLPRGGDTL RYEIKINNFA RNGDTLLFFF SYECFVGDTM ILKMDGGCAG
FFTDAELADG KGVIRTEEEL LARSRATKQI FNPLLDCPRT QFSYGDIHKL LSADIQGCFG
PSHAGPAQPS LCFASEKFLM IEEVSKVERS GGAWGLGLVE GHKQLEPNHW YFPCHFKDDQ
VMAGSLMAEG CGQLLQFYML HLGMHTQTQN GRFQPLENAS QKVRCRGQVI PQSARLTYRM
EVTEIGFSPR PYAKANIDIL LNGKVVVDFQ NLGVMIKEEA ECTRYPELES SDASSAQAKA
NQGASANAPL MTNAPLMAQV PDLSAAPNKG VIPLTHVEAP VTPDYPNRVP DTVPFTPYHL
FEFATGDIEK CFGPEFAIYR GMIPPRTPCG DLQLTTRVIE VNGQRGDFKR PASCIAEYEV
PRDAWYFDAN SHQALMPYSV MMEIALQPNG FISGYMGTTL GFPGLELFFR NLDGSGELLR
QVDLRGKTIV NDSRLLSTVM AGTNIIQSFS FELSTDGEPF YRGTAVFGYF KAEALKDQLG
LDNGKTTQPW HQAKGITPDI RVDLLDKGGR HFNAPAGQPH YRLAGGQLNF IDSVEIVDNG
GTHGLGYLYA ERTIDPSDWF FQFHFHQDPV MPGSLGVEAI IETMQTYAIS KDLGAGFTNP
KFGQILSNIK WKYRGQINPL NKQMSMDVSI TSVKEDAGKL VITGNASLSK DGLRIYEVSD
IAICIEEA
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