Gene Shew_2650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2650 
Symbol 
ID4924128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3124727 
End bp3125098 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content51% 
IMG OID640164245 
Producthypothetical protein 
Protein accessionYP_001094775 
Protein GI127513578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAACAA AATTAATAAC AGCATTGGTC TTCGGCGCGA CCAGTTTAGC GCTATCTGGG 
TGTGTATTGA ATGTGGGTGA AGGTGACAAG GGCTGGAGCA CGGGTAATTC TTGGGAGCGC
GTGCAGGAGC AGAATCGTGT GAACCTGTCT AAGTTGTCCT TGGGGATGAC GCGCGATCAG
GTGATGACAC TTATGGGCAC CGCCGATTTT AACGAGGCCT ATACCAAGCA AGATAAGACG
ATCAACGTGC TCTACTATCG TACCCAGCGT ACGCGCGAAG ATGGCACCAC CACCAAGGAT
GAATGTACGC CTATCGTGAT CACAGACAAT CGCGTCGTGG GCTGGGGTGA GAAGGCTTAC
CACAACATGT AA
 
Protein sequence
MKTKLITALV FGATSLALSG CVLNVGEGDK GWSTGNSWER VQEQNRVNLS KLSLGMTRDQ 
VMTLMGTADF NEAYTKQDKT INVLYYRTQR TREDGTTTKD ECTPIVITDN RVVGWGEKAY
HNM