Gene Shew_2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2647 
Symbol 
ID4924125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3123264 
End bp3123563 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content55% 
IMG OID640164242 
Producthypothetical protein 
Protein accessionYP_001094772 
Protein GI127513575 
COG category[S] Function unknown 
COG ID[COG4323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTAAGC GCTACACCAA CTTCAAAGAC TTCTATCCCT TCTATCTGTC GCAACATAGG 
GATCCCAGAT GCCGCGCCTT GCATTATGTG GGTAGCCTGT CGGTGATCGC GCTCCTGGTG
GTGGCCATAG TGCTAGCCAA GTATTGGCTG CTCTGGCTGC TGCCTGTTCT GGGTTATGGC
GCAGCCTGGA TAGGGCATTT CGTGTTTGAG CGAAACCGGC CCGCAACCTT CGAGTACCCC
TTATACAGCT TCTTTGCCGA CTGGGTGATG TTGGCCCAGT GGCTAACGGG CCGTCGATGA
 
Protein sequence
MSKRYTNFKD FYPFYLSQHR DPRCRALHYV GSLSVIALLV VAIVLAKYWL LWLLPVLGYG 
AAWIGHFVFE RNRPATFEYP LYSFFADWVM LAQWLTGRR