Gene Shew_2646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2646 
Symbol 
ID4924124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3121124 
End bp3121513 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content55% 
IMG OID640164241 
Producthypothetical protein 
Protein accessionYP_001094771 
Protein GI127513574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.995481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACAG ACTTTTTAAT GATCGCCGCG CTGGTGATCA TTGCCGCCTT CTTCTGGCAA 
TTACGCCAGA TGGCCGAACT GAGCCGGGTA TTTGCCAGCA GTGAATGCAA GAAGCAGCGA
GTGCAACTCC TGGCTATCGC CATGGAATCG GCCCGCCCCA GTGTGGGCGG AAGCAGCGGA
CTGACCTGGA AAGCCAAGTT CTTGATGGAG TTCAGCACCG ACGGTATCAA TCAGTATCGC
GCCCATATCT GGATGCATGG TAAGAAGATA GAGAAGATTC AGTGGCCAAT CTTTCCCGAA
CCCGAATGGT TGCAAGCCCC TGAGGCGCGA GGTTCTGTCG GCGGTAGTTG TGGCAGTCGC
GGCGGTTGCA ACTCAGGCGG CTGCAAGTAA
 
Protein sequence
MMTDFLMIAA LVIIAAFFWQ LRQMAELSRV FASSECKKQR VQLLAIAMES ARPSVGGSSG 
LTWKAKFLME FSTDGINQYR AHIWMHGKKI EKIQWPIFPE PEWLQAPEAR GSVGGSCGSR
GGCNSGGCK