| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2611 |
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| Symbol | |
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| ID | 4920710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3078383 |
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| End bp | 3079180 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164205 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001094736 |
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| Protein GI | 127513539 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGATA CCATTTTAAC TGTCGATCAG ATCTCGCTCG CATTTGGTGG GGTAAAGGCC
CTGACCGATG TGAGCTTCGA GGTCGAGCGC GGCGCCGTGT TTTCGATTAT CGGTCCTAAC
GGGGCGGGTA AGACCTCGAT GCTCAACAGC ATCTCGGGGC GCTACCGTCC GCAGAAGGGG
ACAATTCATT TCGATAATCA GGATGTCACC CATCTCAGAC CCAATGCCCG GGCCGATCTC
GGCATAGGCC GTACCTTTCA AAACCTCGCC CTGTTTGGCC ACATGTCGGT GCTGGACAAC
ATCATGGTGG GTCGTCACCA CCTGATGAAG AACAACTGGC TCACCGGCCC ACTGTATTGG
GCCTCACCGG CGCAGAAAGA GGAGCTGGCC CATCGCCGTC AGGTGGAGGA GATCATCGAC
TTTCTCGACA TCTCCCATGT GCGCAAATCC ATCGCTGGCA CTCTCTCTTA CGGCCTGCGC
AAGCGGGTCG AGCTGGCGCG CGCCATGGCG CTCAACCCTA AGCTTATCCT GCTCGACGAG
CCGATGGCGG GAATGAACCT GGAGGAGAAG GAGGATATGG CCCGCTATAT CCTGGATCTC
AACGAGGAGT TCGGCATTAC CGTGGTGATG ATTGAACACG ACATGGGGGT GGTGATGGAT
ATCTCCCATG AGGTGATGGT GCTCGATTTC GGTAAGAAAT TGATCTCTGG CCTGCCCGAA
GCGGTGATGG CCGACGAGCA CGTGAGACAG GCCTATCTCG GCCTTGAAGA TGACGAGCAA
TTACAAGAGG TTGGCTAA
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| Protein sequence | MKDTILTVDQ ISLAFGGVKA LTDVSFEVER GAVFSIIGPN GAGKTSMLNS ISGRYRPQKG
TIHFDNQDVT HLRPNARADL GIGRTFQNLA LFGHMSVLDN IMVGRHHLMK NNWLTGPLYW
ASPAQKEELA HRRQVEEIID FLDISHVRKS IAGTLSYGLR KRVELARAMA LNPKLILLDE
PMAGMNLEEK EDMARYILDL NEEFGITVVM IEHDMGVVMD ISHEVMVLDF GKKLISGLPE
AVMADEHVRQ AYLGLEDDEQ LQEVG
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