Gene Shew_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2604 
Symbol 
ID4920736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3069224 
End bp3070024 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content39% 
IMG OID640164198 
Productrestriction endonuclease 
Protein accessionYP_001094729 
Protein GI127513532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCAAG AAGATTGGTT TATCTTTCAA GAGGAAATAT GCGAGCACTT CAATGCTATT 
GGAGCAGAAG CTGAAACAAA TGTCAGCTTA ACTGGTGTCA GGACAAACCA TGATGTTGAT
GTATTTGTAA AAACTAAATT TTTGGGCATC GACCTAAAAT GGATTGTTGA AGCAAAGCTC
TGGAAACGTA AGGTAAACAA AGGTCACGTA TTAGCTCTTC GCAGCATTTC AGAAGATCTA
GGGGTAGACA AAGCATTTAT TGTTTCTAGC AGTGGATTTC AATCTGGAGC AATTGAGGCT
TCGAAGAATA CCAACGTTAA GCTCTTAACA CTTGACGAGC TCAAAGAAGA AACTAAAGGT
TTTATCGAAT CTGAAATACT TAAAACCTAT GAAGCTCGCT TGGACTTACT GGAAAATAGA
TATTGGTCTC ACTCGAAAGA AATTCGAATT AAATATGGGC TTCGACATCA CCTAATGGAC
TTTCAGCTCA AATTTACGGG ACAAATGTTA TTGGGTGTTG CGAGAAAAGC ACTAATGGCT
GCAACTGATC GGAATTATCC AATTATTCTA GACACGATGC ATGAAGAGCA TCAAGGGGAA
ATGCAGGCTG ACAACTTTCA GCAACTACAA AACTGGTTCA ATCTCAATTT TAATCATTTT
GAAAGTAAGT TGCTTGCAGC TGAATGGGAA ATGCACCAAA ACGGAGAGTA CAACCCAAAC
TGTATTCTAT ATACGAGTGA TGATGTAACT CCTTCTAAGG TTATGGCAAA AGGTATGTAC
ATGGCTGAAG GAAACGGCTA A
 
Protein sequence
MRQEDWFIFQ EEICEHFNAI GAEAETNVSL TGVRTNHDVD VFVKTKFLGI DLKWIVEAKL 
WKRKVNKGHV LALRSISEDL GVDKAFIVSS SGFQSGAIEA SKNTNVKLLT LDELKEETKG
FIESEILKTY EARLDLLENR YWSHSKEIRI KYGLRHHLMD FQLKFTGQML LGVARKALMA
ATDRNYPIIL DTMHEEHQGE MQADNFQQLQ NWFNLNFNHF ESKLLAAEWE MHQNGEYNPN
CILYTSDDVT PSKVMAKGMY MAEGNG