| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2593 |
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| Symbol | |
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| ID | 4920899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3059120 |
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| End bp | 3060844 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164187 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_001094718 |
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| Protein GI | 127513521 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCTG TAACGACATT TGCAACTGAG AACCAATTTC CCCTACAACT GAGCCAATTT
GACGGCGACA CCAGCACGCC ACTGATCGAA CAAACCATAG GCGACTACTT GGATCAGATG
GCCGCCAGCC ACCCCGACCA ACTCGCCATC GTCATGCATC ATCAAGGGAT CCGCTGGAGC
TATCAGGAAT ATCAGTCCCA TATCGACGAA CTGGCCGCCG GCCTGCTGGC CATCGGCATC
AAGCCCGGCG ATCGCGTCGG TATCTGGTCA CCCAACAATA TCGAATGGTG TCTGACCCAG
TTTGCCACCG CCAAGATAGG CGCCATCATG GTGTGCATCA ACCCGGCCTA CCGCCCAGAG
GAGCTACAAT ATGCCCTCAA CAACGTGGGC TGCCGCGCCA TCATCTGCGC CGAGAAATTT
AAGTCCAGCC ACTACCTCTC CATGCTCTAC GAGCTGGCCC CGGAGCTGAA GCAATGCCTG
CCGGGACAGC TTGAGTCGGC CAACCTGCCG AGCCTGGAGT TTGTGATCCG CATGGGCGAT
GAAGCCTCGC CCGGCATGCT CAACTTCAAC CATCTCAAGC GTCCGCTCAC CGAGAGCGAT
CGCAAGGCGC TCAAAGATAC AGCCGCCCAG CTTTCCCCCT TCGACGCCAT CAATATCCAG
TTTACCTCGG GTACTACCGG CAGCCCCAAG GGCGCGACCC TGAGCCATCA CAACATCTTG
AACAACGGCC TATTGGTCGC CAAGGCGATG CGCTTAGGGC TAGAAGACAG ACTCTGTATT
CCCGTGCCCC TGTATCACTG TTTCGGCATG GTGCTGGGTA ACCTCTCCTG CATCTCTGTG
GGCGCATCGG CCATCTACCC GAGCGACTCC TTCGATCCCT TGACTACTCT TGAGGTGGTT
GAGGCCGAGC GCTGCACCGC GCTGCATGGG GTACCGACCA TGTTTATCGC CCAGCTGGAG
CATCCGGAAT TTAAGCGCTT CGATCTCAGC TCGCTGCGCA CCGGCGTGAT GGCGGGGGCT
ACCTGCCCCG AAGAAGTGAT GCGCAGAGTG CAAGATCTCA TGTATATGAA AGAGGTGCTG
ATCGGCTATG GCCAGACGGA ATGTAGCCCC ATCAACAACA TGACGGAAAT AGGCTCGTCA
CTGGAGAAAC GCGTCACCAC GGTCGGCCGC GCCCTGGCTC ACACTCAGGT GAAGATAGTC
GATGAATTCG GCGAGGTGCT CCCCGTTGGC CAACCCGGTG AGGTGTGCAG CCGCGGCTAC
TGCGTGATGC AGTTCTACTG GAACGACGCC GAGAAGACGG CCGCCACCAT AGACAGCGAA
GGCTGGCTCC ACTCAGGCGA TCTGGGTGAG ATGGACAGCG AAGGCTATGT GAAAATCGTC
GGCCGCATCA AGGATATGAT CATCCGCGGC GGCGAGAACA TCTACCCGAG AGAGATCGAA
GAGAAGCTCT ACACCCACCC AGACGTGCAG GATGCCGCCA TCTTCGGCGT GAAGAGCGAG
AAATATGGTG AAGAGGTGTG CGCCTGGATC AAGGTGCAAC CGGGCGCCAG CGTCACCGAG
GAGGAGATAC GTCACTTCCT CACCGAGAAA TTTGCCTACT TTAAGGTCCC GAGATACATC
AAATTCGTCG AGCAGTATCC CATGACGGTG ACCGGTAAGA TCCAGAAGTT CAAGATGCGC
GAGATGATGT ATCAGGAGCT GTATGAGGCG ATCAACTGCA ACTAG
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| Protein sequence | MSAVTTFATE NQFPLQLSQF DGDTSTPLIE QTIGDYLDQM AASHPDQLAI VMHHQGIRWS
YQEYQSHIDE LAAGLLAIGI KPGDRVGIWS PNNIEWCLTQ FATAKIGAIM VCINPAYRPE
ELQYALNNVG CRAIICAEKF KSSHYLSMLY ELAPELKQCL PGQLESANLP SLEFVIRMGD
EASPGMLNFN HLKRPLTESD RKALKDTAAQ LSPFDAINIQ FTSGTTGSPK GATLSHHNIL
NNGLLVAKAM RLGLEDRLCI PVPLYHCFGM VLGNLSCISV GASAIYPSDS FDPLTTLEVV
EAERCTALHG VPTMFIAQLE HPEFKRFDLS SLRTGVMAGA TCPEEVMRRV QDLMYMKEVL
IGYGQTECSP INNMTEIGSS LEKRVTTVGR ALAHTQVKIV DEFGEVLPVG QPGEVCSRGY
CVMQFYWNDA EKTAATIDSE GWLHSGDLGE MDSEGYVKIV GRIKDMIIRG GENIYPREIE
EKLYTHPDVQ DAAIFGVKSE KYGEEVCAWI KVQPGASVTE EEIRHFLTEK FAYFKVPRYI
KFVEQYPMTV TGKIQKFKMR EMMYQELYEA INCN
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