| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2561 |
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| Symbol | |
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| ID | 4921101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3018550 |
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| End bp | 3020091 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164155 |
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| Product | 6-phosphogluconate dehydrogenase |
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| Protein accession | YP_001094686 |
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| Protein GI | 127513489 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATC ACTCAGACCT CCTCGACATA GGCGTGATAG GCCTAGGCGT TATGGGCAAA
AACCTGGCGC TTAATATTGC CGACAATCGC TACCGCGTCG CCGCCTTCGA TCTCGACTCA
ACCAAGCGAG ATGCCCTGCT TGAGCAGGAG CAAAAAGAGC GTCCCGCCTT GCAAGCGCAG
CGCATCCTAG GATGTAGCAA TCTTTCAGAA ATGTTATCCA GTCTCGCAAA ACCTCGGGTG
TTGGTCCTGT CGGTACCTGC CGGTGCGCCA GTGGATGGCG TCTGTAATGC CCTGCTTGAG
GCCGGGATAG AGCAGGACGA TATCGTGGTG GATACGGGCA ACAGCCTGTG GACAGATACC
GTGGCCCGCG AAGCCCAATA TCAGGACAAG TTTATCTTCT TTAGCTGCGC CATCTCAGGC
GGCGAGATGG GTGCACGCTT CGGGCCCTCT CTGATGCCGA GCGGCGACAT CAAGGCCTGG
GACAGAATCA AGCCGATCTG GGAGGCGATT GCCGCCAAGG TAGACCCTAA GACCGGCCTG
CCTATCGAGC GCCAGGAGCC GGGTAACCCT GTGACCGAGG GCGAGCCATG CACCACCTAC
ATAGGCCCGG CAGGCGCCGG TCACTATGTG AAGATGGTGC ATAACGGCAT CGAATACGCC
GACATGCAGC TGATCTGCGA GGCCTATCAG CTGCTGAGCG ATGGTCTTGG GCTGAGCGCC
GCCGAGGTGG GTAAGATCTT CGCGCGCTGG AACCAGGGCA GCCTAAACAG CTACCTGATG
GAGATCAGCG CCGATGTGCT GTCACAGGCC GATCCTCTTA CCGGCAAGCC GCTGGTGGAG
ATGATTCTGG ATAAGGCGGG TCAGAAGGGC ACCGGCCTGT GGACCGCAGT CAGCAGTCTG
CAGATTGGCT GCCCTGCGCC GACTATCGCC GAGGCAGTCT ATGCCAGGGC GGTGAGCACC
CAGAAGCATC AGCGTCAGCA GCTAAGCCTG TTGCTGGCTG GCCCCGAGGC GCTGACATTG
AGTGATGATG AGCGCGCCGC CTTTATCGAT GAGCTGGAAA ACGCCCTCTA CTGCGCCAAG
ATCGCCTGTT ATGCCCAGGG TTTCCAGCTG ATGGCGATGA ATGCTCAGGA GCGCGGCTGG
CGGTTGGATT TTGCCGAAAT CGCCAAGATC TGGCGCGCCG GTTGTATCAT TCGCGCCACC
TTCCTGCAAT CGATCACTCA GGCTTATCAA CAGGCACAGC GGGCGGGTGA GTCTCTCGAT
AACCTGCTGA TGGCCGAGAC CTTTAGCCTG GCCTTGTCGG CCAAGCAGCA AGACTGGCGC
CGCGCGGTGG CAAGGGCCAT CATGAGCGGC GTGCCCGTGC CTTGTATCGG CTCGGCGCTG
GCCTACTACG ACAGCTACCG CAGCGAGACC CTGCCTGCCA ATCTGCTTCA AGGTCAGCGG
GACTTCTTCG GCGCGCATAC CTTTGAGCGT ATCGACATGC CCGCCGGCGA GAAGTATCAC
CTCAACTGGA GCCATAGCGA GCGCACGCTA GAGAAGCTCT AG
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| Protein sequence | MQNHSDLLDI GVIGLGVMGK NLALNIADNR YRVAAFDLDS TKRDALLEQE QKERPALQAQ
RILGCSNLSE MLSSLAKPRV LVLSVPAGAP VDGVCNALLE AGIEQDDIVV DTGNSLWTDT
VAREAQYQDK FIFFSCAISG GEMGARFGPS LMPSGDIKAW DRIKPIWEAI AAKVDPKTGL
PIERQEPGNP VTEGEPCTTY IGPAGAGHYV KMVHNGIEYA DMQLICEAYQ LLSDGLGLSA
AEVGKIFARW NQGSLNSYLM EISADVLSQA DPLTGKPLVE MILDKAGQKG TGLWTAVSSL
QIGCPAPTIA EAVYARAVST QKHQRQQLSL LLAGPEALTL SDDERAAFID ELENALYCAK
IACYAQGFQL MAMNAQERGW RLDFAEIAKI WRAGCIIRAT FLQSITQAYQ QAQRAGESLD
NLLMAETFSL ALSAKQQDWR RAVARAIMSG VPVPCIGSAL AYYDSYRSET LPANLLQGQR
DFFGAHTFER IDMPAGEKYH LNWSHSERTL EKL
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