Gene Shew_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2515 
Symbol 
ID4921282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2958763 
End bp2959359 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content53% 
IMG OID640164109 
Producthypothetical protein 
Protein accessionYP_001094640 
Protein GI127513443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000188858 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTGA ATCACTTAAT GGGGTTATAC ACTCATCCGA AAGAAGAGTG GCACACAATT 
GAGAAAAACC ACGAAGCGCT GAGAAGCAGT CTTAGCCATG TCATGCTAAT CGCCCTCATA
CCGGCCGTCT GTACCTATCT TGCCTCCACC ATGTTCGGCT GGAACCTAGG GGTATCCGAT
CCCCTCTTCC TTACCAAGCA AAGCGCCATG ATGATGTCCA TCAGCATGTA TTTCGGCCTG
ATTGCCGGCG TCTTCGCCCT GGCCTATCTG GCCTATTGGA TGGCAAAGAC CTTCGATGCT
CAACCTAGCT ACACACAGGC GATCGAGCTG GCAGCCTATA CCGCAACGCC ACTCTTTATG
GTCGGCCTGG CGGCGCTGTA TCCTGCGCTC TGGTTCATGA TGGTCGTTGG ACTGGTGGGA
CTCACCTACT CTGTGTACCT GCTCTACACT GGGGTACCTA TCATCATGAA TATCCCGGAA
GAGAAAGGCT TCATCTATGC CAGTTCGGTA GTCACCGCAG GCCTGGTGCT ATTAGTCGCG
CTGATGGCTT CAAGCGTCAT CCTTTGGAGC TTCGGCCTAG GCCCCATGTA CCAATAG
 
Protein sequence
MILNHLMGLY THPKEEWHTI EKNHEALRSS LSHVMLIALI PAVCTYLAST MFGWNLGVSD 
PLFLTKQSAM MMSISMYFGL IAGVFALAYL AYWMAKTFDA QPSYTQAIEL AAYTATPLFM
VGLAALYPAL WFMMVVGLVG LTYSVYLLYT GVPIIMNIPE EKGFIYASSV VTAGLVLLVA
LMASSVILWS FGLGPMYQ