Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2515 |
Symbol | |
ID | 4921282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2958763 |
End bp | 2959359 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640164109 |
Product | hypothetical protein |
Protein accession | YP_001094640 |
Protein GI | 127513443 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000188858 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTGA ATCACTTAAT GGGGTTATAC ACTCATCCGA AAGAAGAGTG GCACACAATT GAGAAAAACC ACGAAGCGCT GAGAAGCAGT CTTAGCCATG TCATGCTAAT CGCCCTCATA CCGGCCGTCT GTACCTATCT TGCCTCCACC ATGTTCGGCT GGAACCTAGG GGTATCCGAT CCCCTCTTCC TTACCAAGCA AAGCGCCATG ATGATGTCCA TCAGCATGTA TTTCGGCCTG ATTGCCGGCG TCTTCGCCCT GGCCTATCTG GCCTATTGGA TGGCAAAGAC CTTCGATGCT CAACCTAGCT ACACACAGGC GATCGAGCTG GCAGCCTATA CCGCAACGCC ACTCTTTATG GTCGGCCTGG CGGCGCTGTA TCCTGCGCTC TGGTTCATGA TGGTCGTTGG ACTGGTGGGA CTCACCTACT CTGTGTACCT GCTCTACACT GGGGTACCTA TCATCATGAA TATCCCGGAA GAGAAAGGCT TCATCTATGC CAGTTCGGTA GTCACCGCAG GCCTGGTGCT ATTAGTCGCG CTGATGGCTT CAAGCGTCAT CCTTTGGAGC TTCGGCCTAG GCCCCATGTA CCAATAG
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Protein sequence | MILNHLMGLY THPKEEWHTI EKNHEALRSS LSHVMLIALI PAVCTYLAST MFGWNLGVSD PLFLTKQSAM MMSISMYFGL IAGVFALAYL AYWMAKTFDA QPSYTQAIEL AAYTATPLFM VGLAALYPAL WFMMVVGLVG LTYSVYLLYT GVPIIMNIPE EKGFIYASSV VTAGLVLLVA LMASSVILWS FGLGPMYQ
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