| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2512 |
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| Symbol | |
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| ID | 4921279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2956409 |
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| End bp | 2956921 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640164106 |
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| Product | peptidylprolyl isomerase |
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| Protein accession | YP_001094637 |
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| Protein GI | 127513440 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000119374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGAT ACAGTCATAT GATCACAATG CAAACCAACC ACGGTGTTAT TAAACTCGAA
CTCGATGCCG AAAAAGCCCC TGCAACCGTC GCTAACTTCA TCAAGTATGC GAAAGACGGC
TTTTATGATG GCACTATCTT TCACCGCGTT ATCGATGGTT TCATGATCCA GGGCGGCGGA
TTCACCAAAG ATATGTCGCA AAAGCGTTGC AACGAAGCGA TCGAAAACGA AGCCAATAAT
GGTCTGTCTA ACCTGGTCGG CACCATAGCT ATGGCCCGCA CCTCAGATCC ACACTCGGCC
ACCGCGCAGT TCTTCATCAA CATCAACGAC AACACCTTCC TCGACTTCAA ATCTGAGTCG
GTACAAGGCT GGGGTTATTG TGTATTCGGT AAAGTCACCG AAGGCATGGA TGTGGTTAAC
CAGATCAAGG CCGTTGCCAC CGGCAACCGC GGCATGCATC AAGACGTACC GCTAGAAGCT
GTGGTCATCG AAAGCGTAAC CGTCGAAGCA TAA
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| Protein sequence | MMRYSHMITM QTNHGVIKLE LDAEKAPATV ANFIKYAKDG FYDGTIFHRV IDGFMIQGGG
FTKDMSQKRC NEAIENEANN GLSNLVGTIA MARTSDPHSA TAQFFININD NTFLDFKSES
VQGWGYCVFG KVTEGMDVVN QIKAVATGNR GMHQDVPLEA VVIESVTVEA
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