| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2476 |
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| Symbol | |
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| ID | 4921144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2910659 |
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| End bp | 2911186 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640164066 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_001094601 |
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| Protein GI | 127513404 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.428605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000502877 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCTAT ACCTGATGGA CATCTGGGAT TCCGTCAGGG GCTTCATGGC CTCCGGAGGC
GACGTCCTCT GGTTGGTTGC GGCAGTGCTA TTCCTCATGT GGGTGTTAAT GCTTGAGCGC
TATTGGTATC TCAATCTGAT TGCGCCAAAA GAGCACAAAA ACATTATCAC CGCATGGGAC
AAGCGAGAGG ATTCAACCTC TTGGCATGCA CACCGTATCC GTGAAGCTTG GGTATCCCAA
GCGAAACAAG ATATGAATGC TCGTATGCTG ATTATCAAAA CCTTAGTAGC CATCTGTCCA
ATGATCGGTC TACTAGGTAC CGTAACCGGT ATGATACAGG TATTCGATGT GATGGCAGTT
CATGGGACGA GTAATGCTCG TATGATGGCA GCTGGTATTT CAATGGCAAC CATGCCGACA
ATGGCGGGAA TGGTCGCAGC GTTATCGGGA GTATTCTTTA GTACTCGCCT AGACGCCAAG
ATGAAAATCA GTATGGAAAA GCTAAAAGAT AGCCTGCCAC ACCACTAG
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| Protein sequence | MMLYLMDIWD SVRGFMASGG DVLWLVAAVL FLMWVLMLER YWYLNLIAPK EHKNIITAWD
KREDSTSWHA HRIREAWVSQ AKQDMNARML IIKTLVAICP MIGLLGTVTG MIQVFDVMAV
HGTSNARMMA AGISMATMPT MAGMVAALSG VFFSTRLDAK MKISMEKLKD SLPHH
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