| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2449 |
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| Symbol | |
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| ID | 4921605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2877697 |
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| End bp | 2879814 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164039 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_001094574 |
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| Protein GI | 127513377 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000341195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCAGTGG TTATTAAGCG GGATGGTTAC CGCACGCCTT TTGACGAAAC AAGGATTCGA
GATGCAGTGG TTGCTGCAGC AAGTTCGGCA GGTATTGATG ATGTTGCCTA TGCCACCGAG
GTGGCCCTAC AAGTACGCCA GTCGGTGGCC GAACTCGAGC AGGTGGATAT TCACGACCTG
CAAGATGCGG TAGAAAATCA GTTGATGGAA GGCCCCTATA AGCAACTCGC CAGGGTCTAT
ATCGAGTATC GCCACGACAG GGATATCCAT CGTGAGTTGA GCAGCCGTCT CAACCGCGAG
ATCCGTGGCT TGGTCGAGCA GAGCAATGCG GCGCTGCTGA ACGAGAACGC CAACAAAGAC
TCCAAGGTGA TCCCCACCCA GCGTGATCTG CTGGCGGGCA TTGTGGCCAA ACACTATGCC
ACACGCCATA TTCTGCCTAA GGATGTGGTG GCGGCCCATG AGTCGGGTGA GATCCATTAT
CACGATCTCG ACTATGCGCC TTTCTTCCCC ATGTTTAACT GTATGCTGAT CGATCTGGCC
GGCATGTTGA CCCATGGCTT CAAGATGGGC AACGCCGAGA TCGAGACCCC TAAGTCTATC
TCGACTGCGA CTGCGGTTAC GGCGCAGATC ATCGCTCAGG TGGCCAGCCA TATCTATGGC
GGCACCACTA TCAACCGTAT CGACGAGGTG CTCGCGCCTT TCGTCGCTAA GAGCTATGAC
AAGCACTATC AGGTCGCGCT GACCTGGGGG ATCACAGACG CCAAGGCCTT TGCCACGGCG
CAGACGGAGA AAGAGTGTCA TGACGCCTTC CAGTCGCTGG AGTATGAGGT CAACACCCTG
CACACAGCCA ACGGCCAGAC GCCTTTCGTC ACCTTCGGCT TCGGTCTGGG CACCTCCTGG
GAGTCGCGCC TCATCCAGTC ATCCATGATG AAGGTACGCA TGACGGGCCT GGGTAAGAAC
CGTAAGACGG CGGTCTTCCC TAAGCTGGTC TTCGCCATTC GCGACGGCAT CAACCACAAG
GCGGGCGACT GCAACTATGA TATCAAGCAG ATGGCGCTCA AGTGTGCGTC GATGCGCATG
TACCCGGATA TCCTCAACTA TGAACAGGTC GAAAAGGTCA CCGGCTCCTT TAAGACGCCT
ATGGGTTGTC GCAGCTTCCT CGGTACCTAC GAGGAGGAGG GCGAGCTGGT GCACGAAGGG
CGTAATAACC TTGGCGTGGT CAGCCTGAAC CTGCCGCGGA TCGCCATCGA GGCTAAGGGC
GACGAGACGC GTTTCTATCA GCTGCTGGAT GAACGTCTGG CGGTGGCCCG CCGTGCCCTG
GACACTCGCA TCGAGCGTCT ACAAGGCGTG AAGGCAAGGG TAGCGCCAAT TCTTTATATG
GAAGGCGCCT GTGGCGTGCG TCTGCGCGCT GATGATGAGA TCAGCGGCAT CTTTAAGAAT
GGCCGCGCCT CTATCTCCCT GGGTTACATC GGCCTGCATG AGACCATCAA TGCCCTCTAC
GGCAGCGAGA CCCATGTGTA TGACAGCGAG GCCCTGCGCG GCAAGGCGCT TGCCATTATC
GAGCACCTCA AGGCGGCGAC CGTACGTTGG CGCGAGGAAT CGGGCTATGG CTTCAGCCTC
TACAGCACGC CGAGCGAGAA CCTGTGTAGC CGCTTCTGCA AGCTGGATAC CGAGGCCTTT
GGGGTGATCG ACGGCGTAAC GGATCGCGGC TACTACACCA ACAGCTTCCA CCTGGATGTG
GAGAAGAAGG TGAATCCGTA CGATAAGTTG GATTTCGAGC AGCCCTATCC GGCGCTCACC
AGTGGCGGCT TCATCTGCTA CGGCGAATAC CCTAACATGC AGCACAATAT CGAGGCGCTG
GAAGATGTGT GGGACTATAG TTACAGCCGG GTGCCTTACT ATGGTACCAA CACGCCGATT
GATGAGTGCT ACGACTGTGG CTTCACCGGC GAGTTTAGCT GTACCAGCAA GGGCTTTACC
TGTCCTAAGT GTGGCAACCA TGAGCCGAGC CGGGTGTCTG TGACCCGCAG GGTGTGTGGC
TACCTAGGTA GCCCGGATGC CAGACCCTTC AACTATGGTA AGCAGGAAGA AGTTAAACGC
CGGGTGAAGC ATCTCTAA
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| Protein sequence | MPVVIKRDGY RTPFDETRIR DAVVAAASSA GIDDVAYATE VALQVRQSVA ELEQVDIHDL
QDAVENQLME GPYKQLARVY IEYRHDRDIH RELSSRLNRE IRGLVEQSNA ALLNENANKD
SKVIPTQRDL LAGIVAKHYA TRHILPKDVV AAHESGEIHY HDLDYAPFFP MFNCMLIDLA
GMLTHGFKMG NAEIETPKSI STATAVTAQI IAQVASHIYG GTTINRIDEV LAPFVAKSYD
KHYQVALTWG ITDAKAFATA QTEKECHDAF QSLEYEVNTL HTANGQTPFV TFGFGLGTSW
ESRLIQSSMM KVRMTGLGKN RKTAVFPKLV FAIRDGINHK AGDCNYDIKQ MALKCASMRM
YPDILNYEQV EKVTGSFKTP MGCRSFLGTY EEEGELVHEG RNNLGVVSLN LPRIAIEAKG
DETRFYQLLD ERLAVARRAL DTRIERLQGV KARVAPILYM EGACGVRLRA DDEISGIFKN
GRASISLGYI GLHETINALY GSETHVYDSE ALRGKALAII EHLKAATVRW REESGYGFSL
YSTPSENLCS RFCKLDTEAF GVIDGVTDRG YYTNSFHLDV EKKVNPYDKL DFEQPYPALT
SGGFICYGEY PNMQHNIEAL EDVWDYSYSR VPYYGTNTPI DECYDCGFTG EFSCTSKGFT
CPKCGNHEPS RVSVTRRVCG YLGSPDARPF NYGKQEEVKR RVKHL
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