Gene Shew_2367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2367 
Symbol 
ID4921894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2768570 
End bp2769160 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content57% 
IMG OID640163957 
Producthypothetical protein 
Protein accessionYP_001094492 
Protein GI127513295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.406853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0535079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTC CTTTACTCTG GCTCGGCGGG GCCGCACTAG GGGCCGCCTT TATCGCCGAC 
GCCAAACAGA AACAACGACA GTTGACCTTA GACAGGCGGT TAGGCCGTGC GCCCAAGGCG
CCAGAGGGTA AGCGGGTGAG CCCACTCGCC CCCAGTGTGT TGCACCTTGG TGAGGTCAAG
GTCACGCCGC CTCCCGGCGC TATGGTGTGC TGCTTCGTCT TCGGGGTGAT AGAGCATACA
GGTATCTGGC TTGGCGACGA TACCTTGGTT GAGCTGCACG GCTGCGGTCT GATCCGGCCT
GTGTCATCTA AGCGTTTCTT GGCGGGGCGC ACCGGTAGCC GTATCTTCGT CGCCTGTGAC
CATCAACATA GACCCTTAAT TGGTGAATCC GTGCTTGAGA GGGCGCAGCA GGCCATCTAT
CAGTATCGCG ACTATGATCT CTTCGATAAC AACTGCCATC GCTTCGTCTG GTATTGTCTT
ACCGGCGAGG AGCTGAGTAT CTCGAGTTTC GATAAGTTTA ATCGTCTGCT GGCCAGCCAT
TTCGCCCAGG CCATCTATTG GGATGAGGCC GCAATAGCTA AGTGTGATTA A
 
Protein sequence
MALPLLWLGG AALGAAFIAD AKQKQRQLTL DRRLGRAPKA PEGKRVSPLA PSVLHLGEVK 
VTPPPGAMVC CFVFGVIEHT GIWLGDDTLV ELHGCGLIRP VSSKRFLAGR TGSRIFVACD
HQHRPLIGES VLERAQQAIY QYRDYDLFDN NCHRFVWYCL TGEELSISSF DKFNRLLASH
FAQAIYWDEA AIAKCD