| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2365 |
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| Symbol | |
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| ID | 4921892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2766629 |
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| End bp | 2767300 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163955 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001094490 |
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| Protein GI | 127513293 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000273195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0972309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCGAA CAACTCCAAT CGTTCATAAA ACGCGCACCC AGGTCGTGGT GGAAGTCTTA
AGAGAGAAAA TCCTTTCAGG CGAAATTGCC GCCGGCGAAC CTTTACGCCA GAGCGCCTTA
GCCGAGGCAC TGAACGTCAG TCGCATCCCG GTAAGAGAAG CCCTGCTGCA ACTCGAAGCC
GAAGGACTCG TAAAGTTTGA AGCCCATAAG GGCGCTACCG CCACCGAATT GTCGGTCGAT
CAGGTCACCG AGCTGTTTGA GCTAAGGGCC CTAATCGAAA CCGATCTGCT TGCCAAGGCG
ATCCCGAATC TCGATGATGA GATGCTGGCT CAGGCCCAGG GTTACCTGGA TGAACTGGAG
GCGGCTTTCC AACAGGAAGA TGCCGTGAGC AGCTGGAGTG AACTCAATAC CAAGTTCCAC
ACCTGCCTGT ATCAGGCGGC CGATCGTCCT CACACCATGG ATGTGGTACA CGGTCTAAAT
ACCAACTGTG ATCGCTACAT ACGTCTACAG CTTCTGCTGG CAGGCGGCAT CCCCAGAGCG
GCGCAAGACC ATAGAGACTT GCTCACCTAC TGTCGTAACC AAGAGATTGA CAAGGCAGTA
ACGCTTCTGA GAGACCATAT ATTACATGCA GCCAATGCCA TACGTGAGCT GGTTGCCCAA
CAGGTGAGCT AA
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| Protein sequence | MSRTTPIVHK TRTQVVVEVL REKILSGEIA AGEPLRQSAL AEALNVSRIP VREALLQLEA
EGLVKFEAHK GATATELSVD QVTELFELRA LIETDLLAKA IPNLDDEMLA QAQGYLDELE
AAFQQEDAVS SWSELNTKFH TCLYQAADRP HTMDVVHGLN TNCDRYIRLQ LLLAGGIPRA
AQDHRDLLTY CRNQEIDKAV TLLRDHILHA ANAIRELVAQ QVS
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