Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2331 |
Symbol | |
ID | 4922111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2725285 |
End bp | 2725824 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640163916 |
Product | YaeQ family protein |
Protein accession | YP_001094456 |
Protein GI | 127513259 |
COG category | [S] Function unknown |
COG ID | [COG4681] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.234988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCCCA AAGCAACCGT TTATAAAGTA CAGCTGCAGA TTGCCGACAT GGATCGTGGC TACTATCAAG ATCATTCCCT CACGCTGTCA CAGCACCCAT CCGAAACCGA TGCCCGCATG ATGGTCAGGC TGCTGGCCTT TGTCCTGAAC GCCAGTGATA CTCTGGCCTT TAGCAAGGGG CTGTGCGTCG AGGGAGAGCC CGAGTTGTGG CAGAAATCCT TGAGCGACGA GATAGAGCTG TGGATCGAGT TTGGTCAGAG CGATGAGAAG TGGTTGAGGA AGGCCAGTAG CCGCGCCGAT AGGGTGTTGC TCTACACCTA TGGCGGCCGC GCTGTGCCTA TCTGGTGGCA GCAAAATGAG CAGGCCCTCA GCCGTTATCA GAACCTTGCT GTGTGGAACC TGCCCGAAGA GCAGGTGAAG GCGATGGGCG ATATAGTCAG TCGCAACATG AGCCTGCAAT ATAATATCAG CGAGGGAGAG GTGTGGCTCT CCAACGATAG CGGCAGCGTG CATATTACCC CTGAGCAGCT AAAGGGATAA
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Protein sequence | MAPKATVYKV QLQIADMDRG YYQDHSLTLS QHPSETDARM MVRLLAFVLN ASDTLAFSKG LCVEGEPELW QKSLSDEIEL WIEFGQSDEK WLRKASSRAD RVLLYTYGGR AVPIWWQQNE QALSRYQNLA VWNLPEEQVK AMGDIVSRNM SLQYNISEGE VWLSNDSGSV HITPEQLKG
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