| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2329 |
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| Symbol | |
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| ID | 4922109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2722905 |
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| End bp | 2723615 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163914 |
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| Product | putative two-component response-regulatory protein YehT |
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| Protein accession | YP_001094454 |
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| Protein GI | 127513257 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0108361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.9097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCACTT GCTTAATTAT CGACGATGAA CCCTTTGCCC GTGAAGCCCT CAACGACCAA
CTCAAGATCT ATCCCGAGCT CGAGGTGATA GGCCAATGCA GCAACGCCAT CGAGGGGATG
CAGGCCATAG GCAAGCTCAA GCCGCAGCTG ATCTTCGTCG ATATCCAGAT GCCCAAGATA
AGCGGGCTCG AAATGGTGGC CATGTTGGAT CCCGACAGCA TGCCCAGGGT GGTGTTTGTC
ACCGCCTTCG ATGAATACGC CATCAAGGCC TTCGACAATC ATGCCTTCGA CTATCTGCTC
AAACCCGTGG ACGAGGCACG CCTGGCCACC ACCATATCCA GGGTGCGCCG GGACTTGCGC
CAGGTGCCAC TCGACGCCGT GCTGCCCACC CAGCTCGAAC ATGTCCCCTG CTACTGCGGT
AACCGTCTCA AGGTGATCAA CGTCGAAGAG GTGGAGTTTG CCTTTAGCGA TCTCAGCGGC
ATACATGTCA CCACGGCGCA GGAGCAGGTG CACACTCATC TGACTCTCAA GGTGCTGGAA
GAGAAGACGG ATCTGGTGCG CTGCCACAAG CAGTATCTGG TCTCACCCCA GGCGATCAGC
GAGATCGTTA TCTTAGAAAA CGGCGCCGAG GTCCTGACCC ACTCGGGGAA GACGGTTCCC
GTCTCCCGCC GCTTCCTGAA ACCGATAAAA CAGCTCTTCG GCTTTCACTA A
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| Protein sequence | MITCLIIDDE PFAREALNDQ LKIYPELEVI GQCSNAIEGM QAIGKLKPQL IFVDIQMPKI
SGLEMVAMLD PDSMPRVVFV TAFDEYAIKA FDNHAFDYLL KPVDEARLAT TISRVRRDLR
QVPLDAVLPT QLEHVPCYCG NRLKVINVEE VEFAFSDLSG IHVTTAQEQV HTHLTLKVLE
EKTDLVRCHK QYLVSPQAIS EIVILENGAE VLTHSGKTVP VSRRFLKPIK QLFGFH
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