| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2320 |
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| Symbol | |
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| ID | 4922170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2715297 |
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| End bp | 2716055 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163905 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001094445 |
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| Protein GI | 127513248 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000515226 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAGCA ATATTCGTGT CGTTCTCGTA GGAACCACTC ATCCAGGTAA TATAGGTTCA
ACCGCCCGTG CCATGAAAAC CATGGGCCTT TCCACGCTTT ATCTCGCCGA GCCCAAGGTG
GCACCCGATG GCCAGTCTGT AGCCCTTGCC GCCGGGGCGT CGGATATCCT TAAACATGCG
GTGACCGTCG ATTGTCTGGA AGATGCCATC GCAGACTGCA GCCTGGTGAT CGCCACCAGT
GCTCGCAGCC GCACCCTGGA CTGGCCCATG TTGGATCCCC GTCAGGCGGG TGAGAAACTC
GCCGGCGCCG CCGTTAACGG CCCAGTAGCC ATCGTCTTTG GCCGCGAGAG TAACGGTCTG
AGCAACGACG AACTGCAAAA GTGCAACTAT CATGTGACCA TACCGGCCAA TCCTGAGTAC
ACCTCGCTTA ATCTGGCCCA GGCGGTGCAG ATCATCTGTT ATGAGGCGCG TGTTGCGCAC
CTCGCCATGG ATCCCGAGAC GGTAGAAGAG CAGGCGTATC CCCTGGCCAA GGAGCAGGAA
AACTTCTTCG TTCACCTGGA GAAGACCCTG TTGTCGACCG GATTTATTAT CAAGCAACAT
CCGGGGCAGG TGATGACTAA GCTCAGACGT CTCTTTAGCC GGGCGAGAAT CGAGAGTCAG
GAGATGAACA TCCTCCGAGG TATCCTGACC TCGGTGGATA AGAAGGTTGA ATTGGCACAG
CAGGCCACAC AAGACGCACA GTCAACGAAG GAAGAATAG
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| Protein sequence | MLSNIRVVLV GTTHPGNIGS TARAMKTMGL STLYLAEPKV APDGQSVALA AGASDILKHA
VTVDCLEDAI ADCSLVIATS ARSRTLDWPM LDPRQAGEKL AGAAVNGPVA IVFGRESNGL
SNDELQKCNY HVTIPANPEY TSLNLAQAVQ IICYEARVAH LAMDPETVEE QAYPLAKEQE
NFFVHLEKTL LSTGFIIKQH PGQVMTKLRR LFSRARIESQ EMNILRGILT SVDKKVELAQ
QATQDAQSTK EE
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