| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2289 |
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| Symbol | |
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| ID | 4922311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2674801 |
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| End bp | 2678010 |
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| Gene Length | 3210 bp |
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| Protein Length | 1069 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163874 |
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| Product | glycosy hydrolase family protein |
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| Protein accession | YP_001094414 |
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| Protein GI | 127513217 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA CCCCAAGACC CTGTGTAACT CTCACCCTGG CTATCGGCCT CGCGCTGGGC
ACCCTACCCA AGGCCGGTCT GGCCGATGGC CTGATCCGCG ACCCCAGGAT CAGGCCAGAC
ACCCAGATCA CAGTTAGCTC CAGCGATCCT CAGCTGGATC TCGCCATCGC CCGTTCGGTC
GATTACATCT ACGACTATCT GGTGGTCGGC CCTCAGCAAT ACCCCACCAC GGAAGAAGCC
GCGCGGATCA CTAAGTTTCG CGACGCTGGG GTACCCGCCG TCCCCTCCCT GTGGGGCAGC
TACCACGGCA CACCGACGGC CAATGCCACA GGCTACAGAG AAAACTTCTG CCTGCGGGAT
GTCGCCCATC AGACAGAGGG GGCGGCCCTG CTGAGCCTCA ACGAAGAAAA TATCGACATG
CTGACCCGCT TCGCCTTCGA CGCCCTGCAG GATAAGCGAG TTGAAGTCAG CGACCCCAAT
CTCGACCCCT TAGACCCCTG GGCCTCGGCG CGCCCTAAGA GTTTCTGGCA GGAATACTGG
ACCCTATGGT CCTACAACTT CTACGGCGCA CCTTACTATA TGGATGCAGG TTTTCAGGAA
CTGCCCGCGC CGCTTGAGCT GTTAGAAAAA GTCTATCGCA TGTATCGATT TACCGGCGAT
GAGCGCTGGT TATCCCAGAC CTTCATGGAC TATGGTGAGC AGCTGCTCAA TGAGTTCGCC
AGTCGTTACG ACTTTAACGG CAACGGCATA GTCGACAACC GCGGTAACGA AGGGATACTG
CCCACCCTGT GGGAGTTTGA GGGCGCCAGC CATATCGGTG ACAACGAACT CAGCTTTAGC
CTGTCGGCGG ATCAGCAAGG CGGCAGTCTC ATCATAGACA AGGGCTACTT CGCCCGACTC
CATGTGCAGG ACATGAGCCT TAAGGTGAGA TTTAGAAACG GCCGCGACGA CTACCTCAGG
GTCAGAATAA ACAACCTGAC TTCCGCCACG GGCGAGGCGC CTATCCTCTC TAACGACTAC
CTGTTTATCG AAAATACCCA GCCGACCCAA GATCTGCTGC TCAGCTTTAA CCGAGCGCCC
GGCGTTACAC TGACCAAACT CACCGACGGC AAGACCCCCT TGGTGCCGGG CAGTGACTAC
AGCATCAGCG GCAATCAGGT CGTCATCAGC AAGAGCTACC TGGATAGGAT CATAGGTAAC
AGCTCCTATC GCTATAAGTT CTCCTTCGGC TTCCAATTTA GCGACGCCAG CCAGGCCCGC
CTGGTGGTAG AATCTGGCTC CCATAGCTAC GCCGATGCCA TCTTGAGTCA ACGCAGCGTC
ACCCTGGACT GGAACAATCT GCAGGATGTA AATCTAACAC TGGATTTCAG CCAGACTCCC
ACGGAAAACC GTGACCTCTA CCGCATCGAG AACAACATGA ACCGTGTGGT CGAAGCCGGC
GATACCCTGG GGGTTCAGTA CCAGGCCATA CTGGCCTATG AGCAGATGCT GCGCGCCAAG
GCGCAACTGG TGAACGACAG CCAGGAAGCC GCGACGCTTA TCGCCAAGGC CGACCAGTAT
CGGGCCAGTG CCCAGTCACT GCTGAGCGAT TTCCAGACCC GCTGGTACGA CGATAAACAG
ATGACCTATG CCAGGGCATT TGACGGCTAT GGCAACGCCA TCTTCGGCTG GGGCCATGAA
AACAGCTTCT TCATGCCGAT GAAAGATCTG CTGGAGCCTG GGGCTAAGGC CGACGCCTAT
CTAAGCTTTA TCCACGATAA CTCGGAAAGC CTCAACGAAG AGGCCAAAAC CTACCTGCCT
GAGGCCTTCT TCAACTACGG CCAGAACGAC CGCGGCTGGT ATTGGATGCA GGCAGGGCTC
AAACGCTTCT TCGCCGATCG CGGTGACGAT CAGGTGATCA AGACCTATCC GGAGATCGCC
TTTACCAACG TCTCCAACCT GGTGACCCAT ATGATGGGCT TCGAGCCCAA TGTGCCCCAG
CATAGCATCA GCACCCTATC GCGCCTGCCG GCGAGCCTTG GGCATGTCGA GGTAGCCAAC
CTGCCCCTTG GCCAGAGCCT GATGCAGACC GGCGACTATC ACAGGGAGAT AGACAGCCTG
CTCACTCTGC GTCACGACAG TCAGCACAGC ACGACACTGA GCCGTAGCGC AGGTAGCGGC
GAGCCCCTGA CCTGGCGTGC CCAGTTTATC GGCAGCTACC CAAGTCTCTA TGTAGATGGT
CAGGCCCTGA CTGCCAGCCA GGCCAGCATC AACGGCGTCA CCATCTCCTA TGTGGATCTC
GACCTCAACG GCGGCCAGAG CATTGTTGTC TCGACCTCAG AAGATGGCAC CGAGCCGCCG
GTCGAACCAC CGGTAGAGCC GCCTGTTGCC TGGACACCAC TGATAGATCT TACGCCCGTC
AGCCAGCAGA GCGACTGGGG CAGCATCAAT CTTAATAAGA GCGTGGACGG TAACCCCCTG
AGAGTCGGCG GTCAGCAATA CGATAACGGC ATAGGCACAC ATGCAAGTGG CGAGATCATC
TACGACCTGC AGGGACAGTA CCAAGGCTTT ACCGCTCTGG TGGGGGTTGA CGATGAGGTG
GGCAGCAACG GCTCGGTGCG CTTCAAGGTC TATCTTGACA ATCAGCTGGC GTTCGACTCA
GGCGTGAAGA CAGGCATTGA CGCCGCCAGT GCGCTCGATC TGGATGTCGT GGGAGTCTCG
CAGCTTAGGC TGGTTATTGA GGATGGCGGC GATGGCATCA ACAGCGATCA CGCCGACTGG
CTACAGCCCC GCCTGACCCG GAAGGTAACA GTGCCGCTGA CCAGCCTCAC GCCCCTAAGT
GCCAGCACAG GTTGGGGCAA CATGCAGTAT GACAGGAGCA TAGAGGGCAA TCCGCTCACC
CTGGGCGGCC AGACCTTTGC GACTGGCATA GGTACCCACT CCACCAGCGA ACTTGTTTAC
GACCTAAAGG GCCTCTATAG CGACTTCGAG GCCAAGGTCG GCGTTGACGA TGAGACCGGT
AGCAATGGCA GTGTGGCCTT TGAGATCTAC CTCGACGGCC AGCTCGCCTA CGACTCTGGC
GCACTGCTTG GCAGCGATTC ACCCCATGCC ATCGCCGTCG ATGTCAGCGG CGCCCAGCAG
ATGCGTCTGG TCACCACAGA CGGCGGCGAT AACATCAACT TCGATCATGC CGACTGGGCC
GTGCCTGTGC TGATTCAAAA CGGCCATTAA
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| Protein sequence | MKITPRPCVT LTLAIGLALG TLPKAGLADG LIRDPRIRPD TQITVSSSDP QLDLAIARSV
DYIYDYLVVG PQQYPTTEEA ARITKFRDAG VPAVPSLWGS YHGTPTANAT GYRENFCLRD
VAHQTEGAAL LSLNEENIDM LTRFAFDALQ DKRVEVSDPN LDPLDPWASA RPKSFWQEYW
TLWSYNFYGA PYYMDAGFQE LPAPLELLEK VYRMYRFTGD ERWLSQTFMD YGEQLLNEFA
SRYDFNGNGI VDNRGNEGIL PTLWEFEGAS HIGDNELSFS LSADQQGGSL IIDKGYFARL
HVQDMSLKVR FRNGRDDYLR VRINNLTSAT GEAPILSNDY LFIENTQPTQ DLLLSFNRAP
GVTLTKLTDG KTPLVPGSDY SISGNQVVIS KSYLDRIIGN SSYRYKFSFG FQFSDASQAR
LVVESGSHSY ADAILSQRSV TLDWNNLQDV NLTLDFSQTP TENRDLYRIE NNMNRVVEAG
DTLGVQYQAI LAYEQMLRAK AQLVNDSQEA ATLIAKADQY RASAQSLLSD FQTRWYDDKQ
MTYARAFDGY GNAIFGWGHE NSFFMPMKDL LEPGAKADAY LSFIHDNSES LNEEAKTYLP
EAFFNYGQND RGWYWMQAGL KRFFADRGDD QVIKTYPEIA FTNVSNLVTH MMGFEPNVPQ
HSISTLSRLP ASLGHVEVAN LPLGQSLMQT GDYHREIDSL LTLRHDSQHS TTLSRSAGSG
EPLTWRAQFI GSYPSLYVDG QALTASQASI NGVTISYVDL DLNGGQSIVV STSEDGTEPP
VEPPVEPPVA WTPLIDLTPV SQQSDWGSIN LNKSVDGNPL RVGGQQYDNG IGTHASGEII
YDLQGQYQGF TALVGVDDEV GSNGSVRFKV YLDNQLAFDS GVKTGIDAAS ALDLDVVGVS
QLRLVIEDGG DGINSDHADW LQPRLTRKVT VPLTSLTPLS ASTGWGNMQY DRSIEGNPLT
LGGQTFATGI GTHSTSELVY DLKGLYSDFE AKVGVDDETG SNGSVAFEIY LDGQLAYDSG
ALLGSDSPHA IAVDVSGAQQ MRLVTTDGGD NINFDHADWA VPVLIQNGH
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