Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2267 |
Symbol | |
ID | 4922622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2646990 |
End bp | 2647736 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640163852 |
Product | hypothetical protein |
Protein accession | YP_001094392 |
Protein GI | 127513195 |
COG category | [R] General function prediction only |
COG ID | [COG2068] Uncharacterized MobA-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.311902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCCTG ATACCTGTAT CCAAGGTAAG GTGATGATCG CCCTGCTGGC GGCGGGGGAG AGCCGACGTT TCGGCGGCGT GAAGCTGGCG CAGTTCCTAA CAAATGATGA CTTGGCGAGT GATGATTTAA TCGCTAATGA CCTAGCAAGC GCTTCGTCAG AACCTAAGCC CACTGAATCT AAAAACATAG TGGCTCATTT CGTTGCCGGT CCATCCCCGA CGACCCTGAT AGGTCATCAA TATAGCGCGC TCAGCGAGGT GGCAGCCAGA TTGGGCGCGA GTCTTTGTGT GATCACCGGT GCCCACCATG AGGCGGTGGC CAGTTGTCTG CCGCCATCGG CTAAGCTAGT GCATAACCCA GATTGGCAAG GGGGGCTTGG TCACTCCATC GCGGTGGCGG CCAAGGAGGC CAGGGCGCTG CTGGCCGAGA CGCTATTGAT CGCCCTTGGG GATCAGCTGC TGCTGGAGAC CGATGATTAC CTCGGGCTGT TTCGCGCCCG CGCCCGGGCA AACACCCGGG TTTGTGCCTA TTATGAGTTA ACTCTGGGGG CGCCAGCGCT GTTTCATTTC GACGATTTTG AGGCGCTGTC TAATCTGAGC GGCGATCGCG GCGCCAAGGC CCTCTTGTCC CGGCGCTACC AGGAGGGCAG CCTCATCGCC ATGGCGATGG AGGATGCTAG CGTCGATATC GATACCCGAT CTCAGCTAAT GGCGTACCTA GCGAGGAGCA AGGCGGGCGC CCAATGA
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Protein sequence | MKPDTCIQGK VMIALLAAGE SRRFGGVKLA QFLTNDDLAS DDLIANDLAS ASSEPKPTES KNIVAHFVAG PSPTTLIGHQ YSALSEVAAR LGASLCVITG AHHEAVASCL PPSAKLVHNP DWQGGLGHSI AVAAKEARAL LAETLLIALG DQLLLETDDY LGLFRARARA NTRVCAYYEL TLGAPALFHF DDFEALSNLS GDRGAKALLS RRYQEGSLIA MAMEDASVDI DTRSQLMAYL ARSKAGAQ
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