Gene Shew_2267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2267 
Symbol 
ID4922622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2646990 
End bp2647736 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content59% 
IMG OID640163852 
Producthypothetical protein 
Protein accessionYP_001094392 
Protein GI127513195 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.311902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCTG ATACCTGTAT CCAAGGTAAG GTGATGATCG CCCTGCTGGC GGCGGGGGAG 
AGCCGACGTT TCGGCGGCGT GAAGCTGGCG CAGTTCCTAA CAAATGATGA CTTGGCGAGT
GATGATTTAA TCGCTAATGA CCTAGCAAGC GCTTCGTCAG AACCTAAGCC CACTGAATCT
AAAAACATAG TGGCTCATTT CGTTGCCGGT CCATCCCCGA CGACCCTGAT AGGTCATCAA
TATAGCGCGC TCAGCGAGGT GGCAGCCAGA TTGGGCGCGA GTCTTTGTGT GATCACCGGT
GCCCACCATG AGGCGGTGGC CAGTTGTCTG CCGCCATCGG CTAAGCTAGT GCATAACCCA
GATTGGCAAG GGGGGCTTGG TCACTCCATC GCGGTGGCGG CCAAGGAGGC CAGGGCGCTG
CTGGCCGAGA CGCTATTGAT CGCCCTTGGG GATCAGCTGC TGCTGGAGAC CGATGATTAC
CTCGGGCTGT TTCGCGCCCG CGCCCGGGCA AACACCCGGG TTTGTGCCTA TTATGAGTTA
ACTCTGGGGG CGCCAGCGCT GTTTCATTTC GACGATTTTG AGGCGCTGTC TAATCTGAGC
GGCGATCGCG GCGCCAAGGC CCTCTTGTCC CGGCGCTACC AGGAGGGCAG CCTCATCGCC
ATGGCGATGG AGGATGCTAG CGTCGATATC GATACCCGAT CTCAGCTAAT GGCGTACCTA
GCGAGGAGCA AGGCGGGCGC CCAATGA
 
Protein sequence
MKPDTCIQGK VMIALLAAGE SRRFGGVKLA QFLTNDDLAS DDLIANDLAS ASSEPKPTES 
KNIVAHFVAG PSPTTLIGHQ YSALSEVAAR LGASLCVITG AHHEAVASCL PPSAKLVHNP
DWQGGLGHSI AVAAKEARAL LAETLLIALG DQLLLETDDY LGLFRARARA NTRVCAYYEL
TLGAPALFHF DDFEALSNLS GDRGAKALLS RRYQEGSLIA MAMEDASVDI DTRSQLMAYL
ARSKAGAQ