Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2261 |
Symbol | |
ID | 4922814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2640707 |
End bp | 2641006 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640163846 |
Product | YciI-like protein |
Protein accession | YP_001094386 |
Protein GI | 127513189 |
COG category | [S] Function unknown |
COG ID | [COG2350] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000337125 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0746903 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGGTACA TGATCTCATC TCAAGATGTT GAAAACAGCT TAGAAAAACG CCTTCAAGCC CGTCCTGACC ACCTAGCACG CCTGCAGGAG CTCTCTGACG AGGGTCGCCT GATGATCGCA GGTCCACACC CAGCTATCGA CAGCGACAAC CCAGGTGAAG CCGGCTTCAC AGGTTCACTG GTAGTAGCCG AGTTCGACTC ACTGGAAGCG GCGCAGGCCT GGGCAGACCA AGACCCATAC GTGGCCGCCG GCGTTTACCA GAGCGTCATC GTAAAACCCT TTAAGCGCGT ACTCCCTTAA
|
Protein sequence | MWYMISSQDV ENSLEKRLQA RPDHLARLQE LSDEGRLMIA GPHPAIDSDN PGEAGFTGSL VVAEFDSLEA AQAWADQDPY VAAGVYQSVI VKPFKRVLP
|
| |