Gene Shew_2261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2261 
Symbol 
ID4922814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2640707 
End bp2641006 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content56% 
IMG OID640163846 
ProductYciI-like protein 
Protein accessionYP_001094386 
Protein GI127513189 
COG category[S] Function unknown 
COG ID[COG2350] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000337125 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0746903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTACA TGATCTCATC TCAAGATGTT GAAAACAGCT TAGAAAAACG CCTTCAAGCC 
CGTCCTGACC ACCTAGCACG CCTGCAGGAG CTCTCTGACG AGGGTCGCCT GATGATCGCA
GGTCCACACC CAGCTATCGA CAGCGACAAC CCAGGTGAAG CCGGCTTCAC AGGTTCACTG
GTAGTAGCCG AGTTCGACTC ACTGGAAGCG GCGCAGGCCT GGGCAGACCA AGACCCATAC
GTGGCCGCCG GCGTTTACCA GAGCGTCATC GTAAAACCCT TTAAGCGCGT ACTCCCTTAA
 
Protein sequence
MWYMISSQDV ENSLEKRLQA RPDHLARLQE LSDEGRLMIA GPHPAIDSDN PGEAGFTGSL 
VVAEFDSLEA AQAWADQDPY VAAGVYQSVI VKPFKRVLP