| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2220 |
|---|
| Symbol | |
|---|
| ID | 4923216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 2592688 |
|---|
| End bp | 2593062 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640163805 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001094345 |
|---|
| Protein GI | 127513148 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00202987 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0726864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAC TACTGTCGGG ATTTCATCAT GATACCGTGG CGGTTAAAGC CAGAGGCGTG
CTCTCTCGGG CCGACTATGA CCAGACCTTG GTTCCGGCGA TAGAGACCAA GTTGCAAGAT
CACTCAACCA TTAAGCTCTG GTATGAATTT AGTGAAGAAT TTGAAGGGGT TTCTGTTGAA
ACCTTGTGGG ATGATGCCAA ATTAGGATTC TTTCATTTGA CGGACTTTTC CAGAGTCGCC
ATCATCACAG ATAGTGAGTG GGTGGCCAAT ACTGCCAAAG TGATGGCCTA TATGGCGCCC
TGTCCGGTGA AGGTATTTGC CCGGCAAGCG GCGGATGAGG CGCTGCGCTG GCTGGGTGAG
AGTTTGCCGG ATTAA
|
|---|
| Protein sequence | MIELLSGFHH DTVAVKARGV LSRADYDQTL VPAIETKLQD HSTIKLWYEF SEEFEGVSVE
TLWDDAKLGF FHLTDFSRVA IITDSEWVAN TAKVMAYMAP CPVKVFARQA ADEALRWLGE
SLPD
|
|---|
| |