| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2039 |
|---|
| Symbol | |
|---|
| ID | 4923768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 2351567 |
|---|
| End bp | 2354269 |
|---|
| Gene Length | 2703 bp |
|---|
| Protein Length | 900 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640163614 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001094164 |
|---|
| Protein GI | 127512967 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.583899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0195221 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGC GTACATTACA CACCCTATTT AAACCTAAGT CGGTGGCCAT CATTGGAGCC
TCTAACGGTG CCAAGCGCGC CGGCAATGTC GTAATGCGCA ACCTGCTCTC CAGCGGGTTT
TCCGGACCTA TCATGCCGGT CACGCCAAAA TACGATGCCG TGATGGGCGT GCTAGCCTAC
CCCAATATCG AAGCCCTGCC GCTTAAGCCC GATCTGGCCA TCATCTGCAC CGCAGCCAGC
CGCGTCCCCG CCATCGTCGA GCGTCTCGCC CAATTTGGCT GCAAGGTGGC AATTATCAAT
GCTTCAGGCA TGGCCAATCA GCTCGATGAA GAGGGGCTGA ATCTACTGAC GCTGACCCGC
GCCCACGCCA AACGCTACGG CATGCGTATC CTCGGTCCCA ACAGCCTGGG AATGATGTTG
CCCAATCTCG GCCTCAACGC CAGCCTGGCA CACACCAGCG CCCTACCGGG TAAAATCGCC
TTTGTCTCCC AGTCTGCCGC CATCTGCACC ACGGTCCTGG ACTGGGCCAA CAACAAGGGG
ATCGGCTTCT CCTCCTTTAT CTCACTTGGC GATGCGACAG ATATCGATTT CGACGAGTTG
CTGGACTTTC TCGGGCGAGA CTCGCGCACC ACGGCGATCA TGATCTACAT AGACTCGGTC
AACGAGAAGC GCCATTTTCT CTCTGCAGCC CGCGCCGCCG CCCGTAACAA GCCGATATTA
GTGATCAAAT CGGGTCGCAG CCTTGAGGGC ACCACGGCCG CTAAGCTACA CACAGGTGGG
GAAGTGGGTA ACGACGCCGT CTACGAGGCC GCCTTCAGAC GCGCGGGTAT GCTGAGGGTA
AACGATCTGG TAGAGCTGTT TGCCGCAGTA GAAACCCTGG CCCACTCTGC TCCATTGCAG
GGCGAGCGTT TGGCGATTCT CAGTAATGGC GGCGGCCCAG CCGTACTAGG CCTAGATCAG
CTAATTCTCG GCGGCGGAAA AGCCGCCACC TTAGACGATG ATACCTTCGA CAAACTCAAT
GCCTTGCTGC CCGATACCTG GTCCGGGCAA AATCCGGTGG ATATCGGAGG CGACGCCGAT
GCCAAGCGAT ACACCCAGAG CCTGGATATT CTGATGAACG CCGATGTGGC CGATGCCATC
TTGGTGTTGC ACTCCCCGTC CGCCCTTGGA GACAGCATAG AGATCGCCGA CAGCATCATA
GAGCTCGTCT CAAAACATCC AAGGCGTCAC AAGGTCAATG TGCTCACCAA CTGGAGCGGC
GAAGACTCGG CCTATCAGGC CCGTAAACAC TTTAACCGCG CCGGGGTGCC CACCTATCGC
ACACCAGAGG GAGCCGTCGG CGCCTTCATG CACATGGTGG AATACAGACG CAACCAAAAG
TTGCTGCAGG AAGTGCCACA ATCTATCCCA GATAATATTC CCACCGATGC CCAACTTGCG
CGCTCCTTGC TGCAGCGGGC GATTGCCGAT AACAAGCAGG TGATCGAGAC CCATGAGGCA
AGCGCCATCC TCAAGGCCTA TGGGCTTAAC ACCATAGAAA CCCACTTTGC CGCCAGTGCG
GAGCGCGCCG CCGAAATCGC CGAACAGATA GGCTATCCCG TCGCCCTTAA GGTGCAATCG
CCGGATATTC ACCATAAATC CGATGTCCAC GGCGTCATGC TTAATCTCAC CTCCCATCAG
GAGGTGTTAC AGGCCGCCGA TGCCATGGTT GGCCGGGTAC ATTCGATCAA CCAGGACGCC
GACATCCAGG GGCTCATAGT GCAGAAGATG GCGCTCACCG CTGGCACCCA GGAGATCCGC
GTCGCGGTGA CCCATGATCC CGTGTTTGGC CCGGCGATTC TGCTTGGCGA AGGCGGCTCC
GAGTGGCAGC CCAGCACAGA TGCGGCGGTT GCCCTGCCAC CACTGAATAT GACTCTGGCC
CGCTACATGG TGATCCAGGC GCTGAAGACC CACAAGCTCA AAGACAGGCA TTTGCCGCTG
GGCTTAGACA TGAACGCTCT GTGCGTCATG CTCACCCAGA TCTCCCATCT CATAATAGAT
TGCCCCGAGA TATCAGGCTT AGATCTTAAC CCTGTGCTGT GCGCCGGTGA GCAGATCACC
CTGTTAGATG TGAATATTCA GCTCAATGCC AATGCCCAGG ACAATACCAA CCGCCTTGCC
ATATGCCCCT ACCCTAAGGA GCTTGAAGAG CATGCGGTAT TGAAAAACGG CCTCGAGATC
ATGCTAAGGC CAATTTTGCC TGAGGATGAG CCTAAACACC TGGCCTTTGA CAACTCCCTC
TCGGACGAAG ACAGATATAA ACGCTATTTT GGCGTGCGCT CTAAGATGAC CCATGAAGAG
ATGGCTGTGC TTACCCAGAT TGACTATGCC AGGGAGATGG CCTTTATCGC CACCACCAAG
GGTGCCGATG GCGATGATAT TACCCTGGGC GCAGTGAGGG CCTCCATCGA CCCCGACAAT
ACCGAGGCCG AGTTCGCCAT GGCGGTGCGC AGCGATCATC AGGGAATAGG CATAGGTAAG
TTATTACTGG AAAAATTGAT CGCCTATTAC AAGGCCAATG ACACCGAGCT GCTCACCGGC
TTCACCATGT TTGAAAACCG CAACATGGCA AGCCTGGCGA AGAAGTTGGG CTTCAGTGTT
ACTTTTGACA TGGAGGAGCA TCTGATCAAG ATGGACATGC CCCTCAAGCC GAAACAAGAC
TAG
|
|---|
| Protein sequence | MSQRTLHTLF KPKSVAIIGA SNGAKRAGNV VMRNLLSSGF SGPIMPVTPK YDAVMGVLAY
PNIEALPLKP DLAIICTAAS RVPAIVERLA QFGCKVAIIN ASGMANQLDE EGLNLLTLTR
AHAKRYGMRI LGPNSLGMML PNLGLNASLA HTSALPGKIA FVSQSAAICT TVLDWANNKG
IGFSSFISLG DATDIDFDEL LDFLGRDSRT TAIMIYIDSV NEKRHFLSAA RAAARNKPIL
VIKSGRSLEG TTAAKLHTGG EVGNDAVYEA AFRRAGMLRV NDLVELFAAV ETLAHSAPLQ
GERLAILSNG GGPAVLGLDQ LILGGGKAAT LDDDTFDKLN ALLPDTWSGQ NPVDIGGDAD
AKRYTQSLDI LMNADVADAI LVLHSPSALG DSIEIADSII ELVSKHPRRH KVNVLTNWSG
EDSAYQARKH FNRAGVPTYR TPEGAVGAFM HMVEYRRNQK LLQEVPQSIP DNIPTDAQLA
RSLLQRAIAD NKQVIETHEA SAILKAYGLN TIETHFAASA ERAAEIAEQI GYPVALKVQS
PDIHHKSDVH GVMLNLTSHQ EVLQAADAMV GRVHSINQDA DIQGLIVQKM ALTAGTQEIR
VAVTHDPVFG PAILLGEGGS EWQPSTDAAV ALPPLNMTLA RYMVIQALKT HKLKDRHLPL
GLDMNALCVM LTQISHLIID CPEISGLDLN PVLCAGEQIT LLDVNIQLNA NAQDNTNRLA
ICPYPKELEE HAVLKNGLEI MLRPILPEDE PKHLAFDNSL SDEDRYKRYF GVRSKMTHEE
MAVLTQIDYA REMAFIATTK GADGDDITLG AVRASIDPDN TEAEFAMAVR SDHQGIGIGK
LLLEKLIAYY KANDTELLTG FTMFENRNMA SLAKKLGFSV TFDMEEHLIK MDMPLKPKQD
|
|---|
| |