| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1999 |
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| Symbol | |
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| ID | 4920963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2310338 |
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| End bp | 2311531 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163568 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | YP_001094124 |
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| Protein GI | 127512927 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00973587 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTTA ACCAGGTTGT ACTGGCCCCC GCAGATCCCA TTTTAGGTCT TACCGATGCT
TTTAAGGCCG ATCCTCGCGC AGATAAGGTT AATTTAGGTG TTGGCATCTA TAAAGATGAA
TCTGGCCAGA CGCCGATCCT CAAGTCAGTT AAGTTAGCCG AGCAAAAATT GCTGGAAACT
GAAACCAGCA AGAGTTATCT GGGTATCGAT GGTGTGATCG CTTATAACCA AGCGGTACAA
GGTTTGTTGT TTGGCACTGA TCACGCCGTG ATGAGTGAGA AGCGCGCGGT AACGGCGCAG
GCGCCGGGCG GAACAGGTTC GCTGAGAATG GCAGCCGAGT TCGTGGTGCG TAATACCGCT
TCTCGCACCG TTTGGGTAAG CAATCTAACT TGGGCAAACC ACAACAACAT TTTCCAGTCT
GCCGGTCTAA CCGTTAAGCA ATATGGTTAT TATGATGCGG CCAGTCACGA CATCGATTTC
GATGCCATGC TTACCAGCCT GGAGCAAGCC AACAGCGGCG ATCTACTCCT GCTGCATGGC
TGCTGCCACA ACCCAACGGG TATCGACCTT AACATCTGTC AGTGGGAAGT GATTGCCCAG
CTTTGTGTCG ACAAAGGCCT GATCCCCTTG TTTGACTTTG CCTATCAAGG TTTCGGTGCC
GGCGTTGAAG AAGACGCTCA GGGTTTGCGT TTGGTCGCCA GCAAGGTGCC TGAACTCTTG
GTGGCTAACT CATTTTCGAA AAACTTTGGT CTCTACAACG AGCGTATTGG CGCCGTGACC
TTAGTCGCCG AAGATGAAGA GACGGCCAAG CGTGCCTTTA GCCAGATCAA GAGCACCATT
CGCAGCAGTT ATTCAAATCC ACCGGCACAT GGTGCATTGA TTGTGGCGAC CATTCTCGGT
GATGCCGAAC TGCGCAAGTT ATGGGAAGAA GAGCTGACAC AGATGCGTGA ACGTATCGCA
GAGATGCGCG TACTGTTCGT CAAGACATTA TCTGAGCAGG GCGTCGAGCA AGATTTCAGT
TTTATCTCGG CGCAAAACGG CATGTTTAGC TTCTCTGGTC TTAATAAGGA TCAGGTGGCA
CGCCTGAAAG AAGAGTTTGG CGTCTATATC GTAGGTTCGG GCCGCATCAG TGTTGCCGGC
ATGACCCGTG CTAACATGGA TACCATCTGC CGCGCTATCG CACAGGTACT GTAA
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| Protein sequence | MIFNQVVLAP ADPILGLTDA FKADPRADKV NLGVGIYKDE SGQTPILKSV KLAEQKLLET
ETSKSYLGID GVIAYNQAVQ GLLFGTDHAV MSEKRAVTAQ APGGTGSLRM AAEFVVRNTA
SRTVWVSNLT WANHNNIFQS AGLTVKQYGY YDAASHDIDF DAMLTSLEQA NSGDLLLLHG
CCHNPTGIDL NICQWEVIAQ LCVDKGLIPL FDFAYQGFGA GVEEDAQGLR LVASKVPELL
VANSFSKNFG LYNERIGAVT LVAEDEETAK RAFSQIKSTI RSSYSNPPAH GALIVATILG
DAELRKLWEE ELTQMRERIA EMRVLFVKTL SEQGVEQDFS FISAQNGMFS FSGLNKDQVA
RLKEEFGVYI VGSGRISVAG MTRANMDTIC RAIAQVL
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