| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1969 |
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| Symbol | |
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| ID | 4921401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2275612 |
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| End bp | 2276211 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640163538 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001094094 |
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| Protein GI | 127512897 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0986563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTAATC TCTATCTAGT CGATGACGAC CAAGACGTCT TAGATTCTTT AAAGTGGATG
CTTGAAGGCA TGGGCTACGC CCCCCAAACC TTCACCAATG CAAGCTGCTT CCTAACTCAG
GTAGATCTGC ATCTGCCCGG GGTCGCTATT TTGGATATTC AGATGCCGGG TGTCGATGGC
ATAGAGTTAC TGCAGCAGAT CAAGCAGCAA GACAGCCCGC TGAGTGTCAT CATGCTCACC
GGCCACGGCA CTATCTCGAT GGCCGTACAA GCCTTACAAC ATGGCGCCAT CGACTTCTTA
GAAAAACCCG CCGATGGCGA CAAACTCCAA GCCTTGATGA AAAAGGCTTC ATTGATGAGC
CTTGACGCCT ACCAGCATAA AGAAAAGGCA TCGAGTGTGG CACAACGAAT CGCTTCGCTG
ACGCCGAGAG AACAACAAGT CATGCACGCC GTGCTCGCCG GTAAGTTAAA CAAGGTCATT
GCCGCTGAAC TCAACATAGC CCAGCGAACC ATTGAGCTCC ACCGCCAAAA AGTTATGCAG
AAGATGCAGG TGAATAATGT CGCCGAGCTC GCTTATTTGA TGGCGATAAC TAAACCCTAA
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| Protein sequence | MCNLYLVDDD QDVLDSLKWM LEGMGYAPQT FTNASCFLTQ VDLHLPGVAI LDIQMPGVDG
IELLQQIKQQ DSPLSVIMLT GHGTISMAVQ ALQHGAIDFL EKPADGDKLQ ALMKKASLMS
LDAYQHKEKA SSVAQRIASL TPREQQVMHA VLAGKLNKVI AAELNIAQRT IELHRQKVMQ
KMQVNNVAEL AYLMAITKP
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